Evidence map›Paper›PMID 42734267›Full record

ArticleBiomacromolecules2026

The Distinct Structural Propensities of Poly-C, A, and U Single-Stranded RNA.

Tong Wang, Weiwei He, Scout Fronhofer, Serdal Kirmizialtin, Lois Pollack

Abstract read
In one paragraph

Article in Biomacromolecules, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Tong WangSchool of Applied and Engineering Physics, Cornell University, Ithaca, New York14853, United States.ORCID 0000-0002-7569-6386
Weiwei HeChemistry Program, Science Division, New York University Abu Dhabi, Abu Dhabi129188, UAE.ORCID 0000-0001-9955-2902
Scout FronhoferSchool of Applied and Engineering Physics, Cornell University, Ithaca, New York14853, United States.
Serdal KirmizialtinChemistry Program, Science Division, New York University Abu Dhabi, Abu Dhabi129188, UAE.ORCID 0000-0001-8380-5725
Lois PollackSchool of Applied and Engineering Physics, Cornell University, Ithaca, New York14853, United States.ORCID 0000-0002-9366-4396

Funding

Training and OutreachP30GM124166 · NIGMS · CORNELL UNIVERSITY · PI RICHARD A. CERIONE · 2019 to 2026
$28.3M
Nucleic acid interactions with partners: ions and proteinsR35GM122514 · NIGMS · CORNELL UNIVERSITY · PI Lois Pollack · 2017 to 2026
$3.8M
Lab Source for Small/Wide Angle X-ray Scattering ExperimentsS10OD028617 · OD · CORNELL UNIVERSITY · PI POLLACK, LOIS · 2020 to 2020
$549k
Natural Sciences and Engineering Research Council of Canada NANew York University Abu Dhabi AD181NIGMS NIH HHS P30 GM124166NIGMS NIH HHS R35 GM122514NIGMS NIH HHS R35-GM122514NIH HHS S10 OD028617
6 · The paper itself

Abstract

Homopolymeric single-stranded RNAs (ssRNAs) are common biological motifs, yet their sequence-dependent solution structures remain incompletely defined. Particularly, rC30 and rA30 have not been characterized with atomic detail. Using optimized force fields, we integrate small-angle X-ray scattering (SAXS) with SAXS-driven molecular dynamics to generate and refine conformational ensembles for thirty-nucleotide-long strands of poly(rA), poly(rC), and poly(rU) (rA30, rC30, and rU30) in identical buffers. Scattering profiles are computed from refined MD-generated ensembles and accurately reproduce the SAXS measurements. Properties of these refined ensembles are further validated by circular dichroism (CD) and UV melting. Clear sequence-dependent order emerges: rA30 is the most compact and helical, rU30 is largely coil-like, and rC30 falls in between. Together, these cross-validated ensembles define distinct conformational propensities of ssRNA homopolymers, specifically highlighting poly(rC) as a unique, moderately structured, yet highly heterogeneous ssRNA. These findings may have implications for nucleotide-specific macromolecular recognition.

Indexed as

Poly APoly CPoly URNAMolecular Dynamics SimulationNucleic Acid ConformationScattering, Small AngleX-Ray DiffractionPoly APoly CPoly URNA

Identifiers

PMID42734267
PMCPMC13576213

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.