Evidence map›Paper›PMID 42732091›Full record

ArticleThe New phytologist2026

TurboID-based proteomic profiling reveals proxitome of the IRT1 metal transporter and new insight into IRT1 endocytosis.

Liza Pellegrin, Steven Fanara, Bertrand Fabre, Carole Pichereaux, Nathalie Leonhardt, Valérie Cotelle, Grégory Vert, Julie Neveu

Abstract read
In one paragraph

Article in The New phytologist, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Liza PellegrinLaboratoire de Recherche en Sciences Végétales (LRSV), Université de Toulouse, CNRS, Toulouse-INP, 31320, Auzeville-Tolosane, France.ORCID https://orcid.org/0009-0007-7013-9082
Steven FanaraLaboratoire de Recherche en Sciences Végétales (LRSV), Université de Toulouse, CNRS, Toulouse-INP, 31320, Auzeville-Tolosane, France.ORCID https://orcid.org/0000-0002-1390-2404
Bertrand FabreLaboratoire de Recherche en Sciences Végétales (LRSV), Université de Toulouse, CNRS, Toulouse-INP, 31320, Auzeville-Tolosane, France.ORCID https://orcid.org/0000-0002-8850-7185
Carole PichereauxInstitut de Pharmacologie et de Biologie Structurale (IPBS), CNRS, Université de Toulouse, 31400, Toulouse, France.ORCID https://orcid.org/0000-0002-7559-5358
Nathalie LeonhardtInstitut de Biosciences et Biotechnologies d'Aix-Marseille (BIAM), Université Aix-Marseille, CEA, CNRS, 13115, Saint-Paul Lez Durance, France.ORCID https://orcid.org/0000-0002-5392-9732
Valérie CotelleLaboratoire de Recherche en Sciences Végétales (LRSV), Université de Toulouse, CNRS, Toulouse-INP, 31320, Auzeville-Tolosane, France.ORCID https://orcid.org/0000-0001-5297-6329
Grégory Vert *Laboratoire de Recherche en Sciences Végétales (LRSV), Université de Toulouse, CNRS, Toulouse-INP, 31320, Auzeville-Tolosane, France.ORCID https://orcid.org/0000-0002-0844-9991
Julie Neveu *Laboratoire de Recherche en Sciences Végétales (LRSV), Université de Toulouse, CNRS, Toulouse-INP, 31320, Auzeville-Tolosane, France.ORCID https://orcid.org/0000-0003-0665-9802

Funding

Agence Nationale de la Recherche ANR-10-LABX-41Agence Nationale de la Recherche ANR-21-CE20-0046
6 · The paper itself

Abstract

Iron Regulated Transporter1 (IRT1) is the major root iron transporter responsible for broad-spectrum metal absorption in Arabidopsis thaliana root epidermal cells. Non-iron metal substrates of IRT1 were recently shown to regulate IRT1 cell surface levels by endocytosis and vacuolar degradation. TurboID-based proximity labeling was recently developed to detect protein-protein interactions and thus shed light on the intricate regulation of proteins in living cells. Although TurboID-based proximity labeling technology has been successfully established in mammals, its application in plant systems remains limited, especially for highly hydrophobic multispan transmembrane proteins. Here, we established TurboID for proximity labeling of IRT1 and identified 494 IRT1-specific proximal proteins, including the previously reported FYVE1 IRT1-interacting protein. To showcase the biological relevance of identified IRT1 proximal proteins, we further characterized the NHX5 Na

Indexed as

ArabidopsisArabidopsis ProteinsCation Transport ProteinsEndocytosisProteomicsPlant RootsProtein BindingUbiquitin-Protein LigasesArabidopsis ProteinsCation Transport ProteinsIRT1 protein, ArabidopsisNHX5 protein, ArabidopsisUbiquitin-Protein LigasesArabidopsisdegradationendocytosisIRT1TurboIDubiquitin

Identifiers

PMID42732091
PMCPMC13669808

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.