Evidence map›Paper›PMID 42728931›Full record

ArticleF1000Research2025

Exploratory Insights into Barriers and Open Practices for Computational Reproducibility in Scientific Research.

Yuri Andrei Gelsleichter, Rita Banzi, Florian Naudet, Constant Vinatier, István Kertész, Monika Varga

Abstract read
In one paragraph

Article in F1000Research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yuri Andrei GelsleichterDepartment of Soil Science, Institute of Environmental Sciences, Hungarian University of Agriculture and Life Sciences, Gödöllő, 2100, Hungary.ORCID https://orcid.org/0000-0003-0869-3000
Rita BanziLaboratory for Health Regulatory Policies, Mario Negri Institute for Pharmacological Research IRCCS, Milan, Italy.
Florian NaudetCHU Rennes, Inserm, Irset (Institut de recherche en santé, environnement et travail)-UMR_S 1085, CIC 1414 (Centre of Clinical Investigation of Rennes), University of Rennes, Rennes, France.
Constant VinatierCHU Rennes, Inserm, Irset (Institut de recherche en santé, environnement et travail)-UMR_S 1085, CIC 1414 (Centre of Clinical Investigation of Rennes), University of Rennes, Rennes, France.
István KertészInstitute of Food Science and Technology, Hungarian University of Agriculture and Life Sciences, Budapest, 1118, Hungary.
Monika VargaInstitute of Animal Sciences, Hungarian University of Agriculture and Life Sciences, Kaposvar, 7400, Hungary.ORCID https://orcid.org/0000-0002-6886-5751

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Rapid adoption of digital technologies across research disciplines underlines the need for accessible and reusable computational data and code. Methods: An anonymous, multidisciplinary survey examined researchers' perceptions, needs, barriers, and self-reported practices concerning open science, data and code publishing and reuse. Results: Of 254 respondents who initiated the survey, 133 completed it, mostly from Europe. Registered reports, replication studies and pre-registration were among the least frequently reported practices (52%, 38% and 42%, reported as Conclusions: As survey was disseminated through open-science channels using volunteer sampling, no response rate could be calculated, and the sample was self-selected toward researchers already engaged with reproducibility. Findings should therefore not be generalized to the wider research community. Within this group, the central finding is a gap between awareness and implementation. High endorsement of open and reproducible practices coexists with lower self-reported adoption. Responses also emphasized the need for structural incentives and institutional support, reflecting perceived limitations in time, resources, expertise, and professional recognition.

Indexed as

Information DisseminationResearchHumansReproducibility of ResultsSoftwareSurveys and QuestionnairesOpen science; Open Data; Open Code; Research transparency; Science integrity; Open Survey; Reproducibility

Identifiers

PMID42728931
PMCPMC13560004

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.