Evidence map›Paper›PMID 42727936›Full record

ArticleJMIR medical informatics2026

Open-Source R Shiny Dashboard (Global Burden of Disease Analysis Suite) for Multimethod Burden of Disease Research: Development and Evaluation Study.

Belal Mohamed Hamed, Mohammed Tarek Hasan, Omar Ahmed Abdelwahab, Moaz Elsayed Abouelmagd, Ramez M Odat, Yasar Sattar, Ramy Mohamed Ghazy

Abstract read
In one paragraph

Article in JMIR medical informatics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Belal Mohamed HamedFaculty of Medicine, Al-Azhar University, Cairo, Egypt.ORCID 0009-0003-8049-5209
Mohammed Tarek HasanAl-Mabara Health Insurance Hospital, Zagazig, Sharqia, Egypt.ORCID 0000-0001-5067-7798
Omar Ahmed AbdelwahabFaculty of Medicine, Al-Azhar University, Cairo, Egypt.ORCID 0000-0001-8266-0245
Moaz Elsayed AbouelmagdKasr-Alainy Faculty of Medicine, Cairo University, Cairo, Egypt.ORCID 0000-0002-0511-2429
Ramez M OdatFaculty of Medicine, Jordan University of Science and Technology, Irbid, Jordan.ORCID 0009-0008-3423-4055
Yasar SattarDepartment of Interventional Cardiology, West Virginia University, Morgantown, WV, United States.ORCID 0000-0002-1304-5748
Ramy Mohamed GhazyHigh Institute of Public Health, Tropical Health Department, Alexandria University, Alexandria, Egypt.ORCID 0000-0001-7611-706X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe Global Burden of Disease (GBD) study provides the most comprehensive global burden estimates available, but translating GBD data downloads into structured analyses requires an integrated, multimethod workflow spanning trend estimation, changepoint detection, demographic decomposition, frontier benchmarking, and health inequality measurement. Existing tools cover portions of this workflow, but none integrate it end-to-end in a code-free interface, creating a substantial technical barrier, particularly for investigators in resource-limited settings.

objectiveThis study aimed to develop and release the GBD Analysis Suite, an open-source R Shiny dashboard that consolidates 11 commonly used analytical modules for GBD-style burden-of-disease research into a single, code-free, web interface supporting user-uploaded data, and to describe its underlying architecture, analytical methodology, and intended applications.

methodsThe application was built using R 4.5.3 and the Shiny framework, integrating established statistical packages, including forecast, segmented, openxlsx, ggplot2, plotly, and others, into modules covering data import, choropleth mapping, estimated annual percentage change, joinpoint regression, Kitagawa and Das Gupta decomposition, multimodel time-series forecasting, descriptive visualization, sociodemographic index-based frontier analysis, descriptive age-period-cohort visualization, slope and relative indices of inequality, and batch export. The application accepts Global Health Data Exchange (GHDx)-formatted CSV or Excel files, automatically detects standard variable names, and enforces internal consistency through built-in validation checks. Kitagawa decomposition uses the symmetric mid-point formulation to ensure exact additivity. The three ensemble forecast models (autoregressive integrated moving average [ARIMA], exponential smoothing state-space [ETS], and a feed-forward neural network [NNETAR]) apply Box-Cox log transformation, with an explicit nonnegativity floor applied to the point forecast and prediction intervals of every model.

resultsThe application is publicly deployed and can be accessed through any modern web browser without requiring local installation. On the bundled 196-country, 34-year demonstration dataset, exporting the full set of outputs completes in approximately 12 seconds at a peak memory footprint of approximately 600 MB. A feature comparison against 5 existing tools (GBD Compare, GBD Foresight, NCI Joinpoint, BAPC, and NordPred) across 14 capability dimensions confirms that the GBD Analysis Suite is the only reviewed platform combining user-uploaded data input with code-free access to all 6 core analytical methods of modern GBD papers. Source code is publicly available under the MIT license.

conclusionsThe GBD Analysis Suite lowers the technical barrier to reproducible, multimethod burden of disease analyses. It is designed particularly for researchers in low- and middle-income countries where biostatistical support, commercial software licenses, and high-performance computing are often unavailable. The modular architecture supports flexibility across disease areas, geographies, and time windows, subject to input data compatibility. Community contributions, feature requests, and collaborative extensions are welcomed through the project's public GitHub repository.

Indexed as

Global Burden of DiseaseSoftwareDashboard SystemsHumansdashboard softwaredata visualizationdecompositionEAPCepidemiologyestimated annual percentage changeglobal burden of diseasehealth inequalityjoinpoint regressionopen-source softwarereproducible researchR Shinytime-series forecastingweb application

Identifiers

PMID42727936
PMCPMC13615381

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.