Evidence map›Paper›PMID 42725746›Full record

ArticleMicrobiology spectrum2026

Comparative evaluation of three high-molecular-weight DNA extraction kits for Oxford Nanopore sequencing of

Alexandre Mrozinski, Daniel Martak, Guillaume Reboul, Muriel Ehmig, Laure Diancourt, Frédéric Barbut, Caroline Le Maréchal, Edward Topp

Abstract readComparative StudyEvaluation Study
In one paragraph

Article in Microbiology spectrum, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Alexandre Mrozinski *Agroécologie Laboratory, INRAE, Université Bourgogne Europe, Dijon, France.ORCID 0009-0009-2128-9126
Daniel Martak *Agroécologie Laboratory, INRAE, Université Bourgogne Europe, Dijon, France.ORCID 0000-0002-7310-9977
Guillaume ReboulANSES, Laboratoire de Ploufragan-Plouzané-Niort, Unité HQPAP, BP53, Ploufragan, France.ORCID 0000-0002-6424-5176
Muriel EhmigNational Reference Laboratory for Clostridioides difficile Saint-Antoine Hospital, AP-HP, Paris, France.ORCID 0000-0002-2677-9521
Laure DiancourtNational Reference Laboratory for Anaerobic Bacteria and Botulism, Institut Pasteur, Paris, France.ORCID 0000-0002-9670-3274
Frédéric BarbutNational Reference Laboratory for Clostridioides difficile Saint-Antoine Hospital, AP-HP, Paris, France.ORCID 0000-0002-4165-0670
Caroline Le MaréchalANSES, Laboratoire de Ploufragan-Plouzané-Niort, Unité HQPAP, BP53, Ploufragan, France.ORCID 0000-0002-1970-3801
Edward ToppAgroécologie Laboratory, INRAE, Université Bourgogne Europe, Dijon, France.ORCID 0000-0002-8273-9372

Funding

France 2030 ANR-22-PAMR-0009
6 · The paper itself

Abstract

IMPORTANCE: High-quality genomic data are essential for accurate characterization of

Indexed as

Clostridioides difficileClostridium perfringensDNA, BacterialNanopore SequencingAnimalsClostridium InfectionsGenome, BacterialHumansMolecular WeightPlasmidsSequence Analysis, DNAWhole Genome SequencingDNA, BacterialClostridioides difficileClostridium perfringenslong-read sequencingMinIONOxford Nanoporeplasmidtoxin-encoding geneswhole-genome sequencing

Identifiers

PMID42725746
PMCPMC13688846

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.