Evidence map›Paper›PMID 42722809›Full record

ArticleVirus genes2026

The interaction between HIV-1 central polypurine tract and host SAMHD1 dNTPase during HIV-1 vector transduction in human primary nondividing monocyte-derived macrophages.

Natalie N Alvarez, Hannah S Burke, Tzipporah Freeman, Sara Taki, Qun Li, Raymond F Schinazi, Baek Kim

Abstract read
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Article in Virus genes, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Natalie N AlvarezDepartment of Pediatrics, Center for ViroScience and Cure, School of Medicine, Emory University, HSRB-1 E432, 1760 Haygood Drive, Atlanta, GA, 30322, USA.
Hannah S BurkeDepartment of Pediatrics, Center for ViroScience and Cure, School of Medicine, Emory University, HSRB-1 E432, 1760 Haygood Drive, Atlanta, GA, 30322, USA.
Tzipporah FreemanDepartment of Pediatrics, Center for ViroScience and Cure, School of Medicine, Emory University, HSRB-1 E432, 1760 Haygood Drive, Atlanta, GA, 30322, USA.
Sara TakiDepartment of Pediatrics, Center for ViroScience and Cure, School of Medicine, Emory University, HSRB-1 E432, 1760 Haygood Drive, Atlanta, GA, 30322, USA.
Qun LiDepartment of Pediatrics, Center for ViroScience and Cure, School of Medicine, Emory University, HSRB-1 E432, 1760 Haygood Drive, Atlanta, GA, 30322, USA.
Raymond F SchinaziDepartment of Pediatrics, Center for ViroScience and Cure, School of Medicine, Emory University, HSRB-1 E432, 1760 Haygood Drive, Atlanta, GA, 30322, USA.
Baek KimDepartment of Pediatrics, Center for ViroScience and Cure, School of Medicine, Emory University, HSRB-1 E432, 1760 Haygood Drive, Atlanta, GA, 30322, USA. baek.kim@emory.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sterile alpha motif and histidine-aspartate domain-containing protein 1 (SAMHD1) is a dNTPase that depletes intracellular dNTP pools in nondividing cells such as human monocyte-derived macrophages (MDMs). These low dNTP levels suppress HIV-1 reverse transcription kinetics in MDMs. In contrast, viral protein X (Vpx), an accessory protein encoded by human immunodeficiency virus type 2 (HIV-2) and some simian immunodeficiency viruses (SIVs), induces degradation of SAMHD1, thereby increasing cellular dNTP pools and promoting a more permissive infection in MDMs. Our previous study demonstrated that the central polypurine tract (cPPT) facilitates completion of HIV-1 reverse transcription, particularly when reverse transcription is kinetically delayed due to dNTP limitation in nondividing human lung fibroblasts. However, the role of cPPT during HIV-1 replication in macrophages where SAMHD1 establishes low dNTP pools and kinetically restricts viral reverse transcription remains untested. To address this question, we performed time-course analyses of transduction efficiency and fluorescence intensity in MDMs transduced with two distinct HIV-1 vector systems containing or lacking the cPPT sequence, in the presence or absence of Vpx. Our data show that while either cPPT insertion or Vpx treatment alone modestly increases HIV-1 vector transduction efficiency, the combined presence of cPPT and Vpx results in a pronounced enhancement of both transduction efficiency and fluorescence intensity in MDMs. Overall, these findings demonstrate that cPPT and Vpx act cooperatively to enhance HIV-1 vector transduction in nondividing MDMs, supporting an interplay between cPPT function and Vpx-mediated SAMHD1 degradation in macrophages.

Indexed as

Central purine tractHIV-1MacrophageReverse transcriptionSAMHD1Vpx

Identifiers

PMID42722809

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.