Evidence map›Paper›PMID 42721001›Full record

ArticleMolecular reproduction and development2026

JMJD3 Deficiency Alters H3K27me3 Landscapes and Adhesion-Related Transcriptional Programs in Aged Spermatogonia.

Yusuke Sakurai, Hozumi Nomura, Kazumasa Aoyama, Sakurako Shima, Aya Yoshida, Tokuko Iwamori, Atsushi Iwama, Naoki Iwamori

Abstract read
In one paragraph

Article in Molecular reproduction and development, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yusuke SakuraiLaboratory of Zoology, Graduate School of Bioresource and Bioenvironment Sciences, Kyushu University, Fukuoka, Japan.ORCID https://orcid.org/0009-0009-9317-5515
Hozumi NomuraLaboratory of Zoology, Graduate School of Bioresource and Bioenvironment Sciences, Kyushu University, Fukuoka, Japan.
Kazumasa AoyamaDivision of Hygienic Chemistry, Faculty of Pharmacy, Keio University, Tokyo, Japan.ORCID https://orcid.org/0000-0002-2136-4562
Sakurako ShimaLaboratory of Zoology, Graduate School of Bioresource and Bioenvironment Sciences, Kyushu University, Fukuoka, Japan.
Aya YoshidaLaboratory of Zoology, Graduate School of Bioresource and Bioenvironment Sciences, Kyushu University, Fukuoka, Japan.
Tokuko IwamoriLaboratory of Zoology, Graduate School of Agriculture, Kyushu University, Fukuoka, Japan.
Atsushi IwamaDivision of Stem Cell and Molecular Medicine, Center for Stem Cell Biology and Regenerative Medicine, The Institute of Medical Sciences, The University of Tokyo, Tokyo, Japan.ORCID https://orcid.org/0000-0001-9410-8992
Naoki IwamoriLaboratory of Zoology, Graduate School of Bioresource and Bioenvironment Sciences, Kyushu University, Fukuoka, Japan.ORCID https://orcid.org/0000-0001-5903-8386

Funding

Inamori FoundationJapan Society for the Promotion of Science 17H05648Japan Society for the Promotion of Science 19H03139Japan Society for the Promotion of Science 19K06440Japan Society for the Promotion of Science 26712026Takeda Science Foundation
6 · The paper itself

Abstract

Spermatogonial stem cells (SSCs) sustain spermatogenesis throughout life by generating differentiating spermatogonia, spermatocytes, and spermatozoa. During this process, male germ cells are interconnected by intercellular bridges (ICBs). Although ICB fragmentation has been implicated in the replenishment of the SSC pool, the molecular mechanisms underlying this process remain poorly understood. Our previous study demonstrated that JMJD3 deficiency promotes spermatogonial fragmentation and preserves spermatogenesis during ageing. To investigate the molecular basis underlying these phenotypes, we performed H3K27me3 ChIP-seq using a spermatogonia-enriched CD9-positive cell fraction together with RNA-seq of SSC-enriched spermatogonial populations from JMJD3-deficient mice. Cross-dataset comparison revealed extensive alterations in H3K27me3 landscapes accompanied by age- and JMJD3-dependent transcriptional changes. RNA-seq demonstrated downregulation of multiple signaling pathways, including NF-κB and TNF signaling, together with dysregulation of extracellular matrix (ECM)- and cell adhesion-related genes in JMJD3-deficient spermatogonia. Consistent with these transcriptional changes, JMJD3-deficient spermatogonia exhibited excessive ECM accumulation and altered expression of adhesion-associated genes in vivo. Although several mesenchymal-associated genes were upregulated, canonical cadherin switching was not observed, indicating the presence of partial epithelial-mesenchymal transition (EMT)-like transcriptional features rather than a complete EMT program. Cross-dataset comparison further identified Ptk2b as a candidate gene associated with JMJD3-dependent H3K27me3 changes. These findings suggest that JMJD3 deficiency is associated with extensive epigenomic remodeling and adhesion-related transcriptional alterations in aged spermatogonia and provide candidate molecular pathways that may contribute to the maintenance of spermatogenesis during ageing.

Indexed as

AgingHistonesJumonji Domain-Containing Histone DemethylasesSpermatogenesisSpermatogoniaTranscription, GeneticAnimalsCell AdhesionExtracellular MatrixMaleMiceMice, KnockoutSignal TransductionHistonesJumonji Domain-Containing Histone DemethylasesKdm6b protein, mousecadherin switchdifferentiationepithelial‐mesenchymal transitionJMJD3spermatogonial stem cells

Identifiers

PMID42721001
PMCPMC13561158

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.