Evidence map›Paper›PMID 42717086›Full record

ArticleNature2026

Predicting genome-wide functional constraints with GPN-Star.

Chengzhong Ye, Gonzalo Benegas, Carlos Albors, Jianan Canal Li, Sebastian Prillo, Peter D Fields, Brian Clarke, Yun S Song

Abstract read
PubMed Publisher
In one paragraph

Article in Nature, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Chengzhong Ye *Department of Statistics, University of California, Berkeley, CA, USA.
Gonzalo Benegas *Computer Science Division, University of California, Berkeley, CA, USA.
Carlos AlborsComputer Science Division, University of California, Berkeley, CA, USA.
Jianan Canal LiComputer Science Division, University of California, Berkeley, CA, USA.
Sebastian PrilloComputer Science Division, University of California, Berkeley, CA, USA.
Peter D FieldsThe Jackson Laboratory, Bar Harbor, ME, USA.
Brian ClarkeDivision of Computational Genomics and Systems Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany.ORCID http://orcid.org/0000-0002-6695-286X
Yun S SongDepartment of Statistics, University of California, Berkeley, CA, USA. yss@berkeley.edu.ORCID http://orcid.org/0000-0002-0734-9868

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genomic language models have emerged as a powerful approach for learning genome-wide functional constraints directly from DNA sequences

Identifiers

PMID42717086

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.