Evidence map›Paper›PMID 42715406›Full record

ArticleJournal of medical Internet research2026

Natural Language Processing Identification of Nonprescribed Fentanyl Use in Electronic Health Records: Algorithm Development and Validation Study.

Joshua Trujeque, Joseph A Simonetti, Isai Ortiz, Nicholas E Ingraham, Nathan Mesfin, Jeremy Yeung, Rui Zhang, Lisa A Brenner, R Adams Dudley

Abstract readValidation Study
In one paragraph

Article in Journal of medical Internet research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Joshua TrujequeMinneapolis Veterans Affairs Healthcare System, Center for Care Delivery and Outcomes Research, One Veterans Drive, Minneapolis, MN, 55417, United States.ORCID http://orcid.org/0000-0003-0882-463X
Joseph A SimonettiRocky Mountain Mental Illness Research, Education, and Clinical Center for Suicide Prevention, Rocky Mountain Regional VA Medical Center, Aurora, CO, United States.ORCID http://orcid.org/0000-0001-6971-6021
Isai OrtizCenter for Veterans Research and Education, Minneapolis, MN, United States.ORCID http://orcid.org/0009-0005-0407-2559
Nicholas E IngrahamDivision of Pulmonary, Allergy, and Critical Care Medicine, Department of Medicine, University of Minnesota Medical School, Minneapolis, MN, United States.ORCID http://orcid.org/0000-0002-0292-0594
Nathan MesfinDivision of Pulmonary, Allergy, and Critical Care Medicine, Department of Medicine, University of Minnesota Medical School, Minneapolis, MN, United States.ORCID http://orcid.org/0000-0001-8419-0339
Jeremy YeungInstitute for Health Informatics, University of Minnesota, Minneapolis, MN, United States.ORCID http://orcid.org/0009-0003-4131-6343
Rui ZhangDepartment of Surgery, University of Minnesota, Minneapolis, MN, United States.ORCID http://orcid.org/0000-0001-8258-3585
Lisa A BrennerBrain Health Coordinating Center, Rocky Mountain VA Regional Medical Center, Aurora, MN, United States.ORCID http://orcid.org/0000-0002-2629-214X
R Adams DudleyDivision of Pulmonary, Allergy, and Critical Care Medicine, Department of Medicine, University of Minnesota Medical School, Minneapolis, MN, United States.ORCID http://orcid.org/0000-0002-8532-8552

Funding

TRAINING-PULMONARY CELL &MOLECULAR BIOLOGY &PHYSIOLOGYT32HL007741 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI DUDLEY, R. ADAMS, INGBAR, DAVID H · 1994 to 2023
$13.9M
Racial disparities in access to kidney transplantationR01DK115629 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI R. Adams Dudley, KIRSTEN L. JOHANSEN · 2018 to 2026
$4.5M
Detecting synergistic effects of pharmacological and non-pharmacological interventions for AD/ADRDR01AG078154 · NIA · UNIVERSITY OF MINNESOTA · PI HUA XU, RUI ZHANG · 2022 to 2026
$4.2M
A Translational Informatics Framework to Mine Efficacy and Safety of Dietary SupplementsR01AT009457 · NCCIH · UNIVERSITY OF MINNESOTA · PI RUI ZHANG · 2017 to 2026
$4.1M
SCH: A New Computational Framework for Learning from Imbalanced Biomedical DataR01CA287413 · NCI · UNIVERSITY OF MINNESOTA · PI CUI, YING, SUN, JU · 2023 to 2025
$1.2M
Identifying Areas to Improve ICU Outcomes through Provider VariationK23HL166783 · NHLBI · UNIVERSITY OF MINNESOTA · PI Nicholas E Ingraham · 2023 to 2026
$645k
Mining minority enriched AllofUs data for innovative ethnic specific risk prediction modelingR21MD019134 · NIMHD · UNIVERSITY OF MINNESOTA · PI HOU, JUE, WANG, JINHUA · 2023 to 2024
$436k
AHRQ HHS P30 HS029744HSRD VA IK2 HX002861NCCIH NIH HHS R01 AT009457NCI NIH HHS R01 CA287413NHLBI NIH HHS K23 HL166783NHLBI NIH HHS T32 HL007741NIA NIH HHS R01 AG078154NIDDK NIH HHS R01 DK115629NIMHD NIH HHS R21 MD019134
6 · The paper itself

Abstract

Background: Overdose and suicide due to nonprescribed fentanyl use have increased significantly, yet health care systems lack reliable methods to identify patients who use nonprescribed fentanyl. Objective: This study aimed to develop natural language processing approaches to identifying nonprescribed fentanyl use in electronic health record (EHR) documentation. Methods: This retrospective study included Veterans Health Administration patients seen between April 5, 2023, and December 23, 2024. A term list was developed to identify fentanyl-related mentions in clinical text, and 250-character snippets surrounding identified mentions were extracted. Veterans (n=3878) were randomly sampled from 5 predefined groups based on the presence of 1 of 4 terms ("fent," "blues," "M30s," and "tranq") in their EHR documentation. Physician annotators classified snippets into "nonprescribed fentanyl use," "prescribed fentanyl use," or "other," with interannotator agreement evaluated using the mean pairwise Cohen κ. Cross-validation folds were constructed at the patient level between training and test sets. Penalized logistic regression, Bio-ClinicalBERT, Llama 3-8B, and Mistral-7B were trained on labeled data and compared. Model performance was evaluated using precision, recall, and Results: Of 7389 snippets, 9.6% (n=709) were classified as "nonprescribed fentanyl use," 40.3% (n=2981) were classified as "prescribed fentanyl use," and 50% (n=3699) were classified as "other." Interannotator agreement was high (κ=0.822). Llama 3-8B achieved the highest Conclusions: Natural language processing can identify nonprescribed fentanyl use in EHR documentation, although model performance for this class was lower than overall model performance, reflecting the clinical complexity of identifying nonprescribed use and the variable ways in which clinicians document this problem. This approach may support risk prediction and targeting of interventions to patients exposed to nonprescribed fentanyl.

Indexed as

AlgorithmsElectronic Health RecordsFentanylNatural Language ProcessingHumansRetrospective StudiesFentanylfentanylnatural language processingopioidoverdoseveteran

Identifiers

PMID42715406
PMCPMC13557318

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.