Evidence map›Paper›PMID 42710677›Full record

ArticleThe Journal of biological chemistry2026

Discovery and structural analysis of glycoside hydrolase family 176 α-1,2 glucosidase from Arthrobacter humicola A8F5.

Ryota Yasukochi, Takashi Suzuki, Terumasa Toraya, Keiko Hino, Tetsuya Mori, Toma Kashima, Akimasa Miyanaga, Hikaru Watanabe, Shinya Fushinobu

Abstract read
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Article in The Journal of biological chemistry, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Ryota YasukochiDepartment of Biotechnology, The University of Tokyo, Tokyo, Japan.
Takashi SuzukiResearch & Development Division, Nagase Viita CO., LTD, Okayama, Japan.
Terumasa TorayaResearch & Development Division, Nagase Viita CO., LTD, Okayama, Japan.
Keiko HinoResearch & Development Division, Nagase Viita CO., LTD, Okayama, Japan.
Tetsuya MoriResearch & Development Division, Nagase Viita CO., LTD, Okayama, Japan.
Toma KashimaDepartment of Biotechnology, The University of Tokyo, Tokyo, Japan; Collaborative Research Institute for Innovative Microbiology, The University of Tokyo, Tokyo, Japan.
Akimasa MiyanagaDepartment of Biotechnology, The University of Tokyo, Tokyo, Japan; Collaborative Research Institute for Innovative Microbiology, The University of Tokyo, Tokyo, Japan.
Hikaru WatanabeResearch & Development Division, Nagase Viita CO., LTD, Okayama, Japan. Electronic address: hikaru.watanabe@nagase.co.jp.
Shinya FushinobuDepartment of Biotechnology, The University of Tokyo, Tokyo, Japan; Collaborative Research Institute for Innovative Microbiology, The University of Tokyo, Tokyo, Japan. Electronic address: asfushi@mail.ecc.u-tokyo.ac.jp.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glycoside hydrolases (GHs) exhibit remarkable specificity dictated by the structural configuration of their target glycosidic linkages. While enzymes that process α-1,4- and α-1,6-linkages in starch or glycogen are well-characterized, those acting on less common bonds, such as α-1,2-glucosidic linkages, remain largely underexplored. In this study, we report the discovery and structural elucidation of a novel α-1,2-glucosidase from Arthrobacter humicola A8F5 (A8F5 glucosidase), representing a newly uncovered activity within the poorly characterized GH176 family. Biochemical characterizations revealed that A8F5 glucosidase exclusively cleaves α-1,2-linkages via an anomer-inverting mechanism, with a preference for short kojioligosaccharides. To circumvent crystallization obstacles caused by high loop flexibility and translational non-crystallographic symmetry, we engineered a loop-truncated variant. This strategy enabled the determination of high-resolution (up to 1.79 Å) crystal structures of the enzyme in its ligand-free form and in complex with kojibiose, kojitriose, and selaginose. A8F5 glucosidase adopts an (α/α)

Indexed as

crystal structureenzyme discoveryglycoside hydrolasekojibioseα-glucan

Identifiers

PMID42710677
PMCPMC13671375

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.