Evidence map›Paper›PMID 42709340›Full record

ArticleImmunologic research2026

Deep learning for automated classification of antinuclear antibody patterns on HEp-2 indirect immunofluorescence images.

Altan Akıneden, Rayan Abri, Fatih Mehmet Akıllı, Sara Abri, Selçuk Türkel, Beste Akıllı, Emre Avuçlu, Yücel Duman

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Article in Immunologic research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Altan AkınedenDepartment of Microbiology, Aksaray University Faculty of Medicine, Aksaray, Turkey.
Rayan AbriDepartment of Artificial Intelligence Engineering, OSTİM Technical University, Ankara, Turkey.
Fatih Mehmet AkıllıDepartment of Microbiology, Aksaray Training and Research Hospital, Aksaray, Turkey. drmehmetakilli@gmail.com.ORCID https://orcid.org/0000-0001-8541-7742
Sara AbriDepartment of Computer Engineering, OSTİM Technical University, Ankara, Turkey.
Selçuk TürkelDepartment of Microbiology, Aksaray University Faculty of Medicine, Aksaray, Turkey.
Beste AkıllıDepartment of Internal Medicine, Aksaray Training and Research Hospital, Aksaray, Turkey.
Emre AvuçluDepartment of Software Engineering, Aksaray University, Aksaray, Turkey.
Yücel DumanDepartment of Microbiology, Aksaray University Faculty of Medicine, Aksaray, Turkey.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Standardizing the interpretation of ANA patterns is a persistent challenge in rheumatology due to inter-observer discordance. This research introduces an ensemble deep learning framework optimized for the International Consensus on ANA Patterns (ICAP) system. By integrating ResNet-50 and EfficientNet-B0 via validation-tuned weighting and logit-level averaging, we processed both a single-label benchmark and a high-variability clinical dataset containing overlapping (multi-label) patterns. Our model demonstrated high fidelity in the single-label setting (92.5% accuracy; MCC = 0.9193). Critically, in the independent hospital cohort, the system managed the complexities of co-occurring patterns with a 1.26% Hamming loss and a micro F1-score of 82.91%. By achieving "near-miss" accuracy (within two labels) in over 95% of clinical cases, this framework demonstrates its potential utility as a decision-support tool that may help mitigate the inherent variability associated with manual HEp-2 cell analysis.

Indexed as

Antibodies, AntinuclearDeep LearningClassification AlgorithmsConvolutional Neural NetworksFluorescent Antibody Technique, IndirectHumansImage Processing, Computer-AssistedAntibodies, AntinuclearAntinuclear antibodiesDeep learningEnsemble learningHEp-2 indirect immunofluorescenceICAP classificationMulti-label classification

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.