Evidence map›Paper›PMID 42703013›Full record

ArticleJournal of anatomy2026

The XenCart Protocol: A method for Alcian blue labeling and quantitative analysis of craniofacial cartilage in Xenopus.

Umar Aziz, Leona Bhandari, Claudia Lizama, Riya Maurya, Amanda J G Dickinson

Abstract read
In one paragraph

Article in Journal of anatomy, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Umar AzizSchool of Life Sciences and Sustainability, Virginia Commonwealth University, Richmond, Virginia, USA.
Leona BhandariSchool of Life Sciences and Sustainability, Virginia Commonwealth University, Richmond, Virginia, USA.
Claudia LizamaSchool of Life Sciences and Sustainability, Virginia Commonwealth University, Richmond, Virginia, USA.
Riya MauryaSchool of Life Sciences and Sustainability, Virginia Commonwealth University, Richmond, Virginia, USA.
Amanda J G DickinsonSchool of Life Sciences and Sustainability, Virginia Commonwealth University, Richmond, Virginia, USA.ORCID https://orcid.org/0000-0002-1427-9140

Funding

Perturbation of Craniofacial Morphogenesis, Healing, and Regeneration by E-cigarette Aerosol MixturesR56DE026024 · NIDCR · VIRGINIA COMMONWEALTH UNIVERSITY · PI DICKINSON, AMANDA JANE, OLIVARES-NAVARRETE, RENE · 2016 to 2017
$447k
NIDCR NIH HHS R56 DE026024NIH HHS 5R56DE026024-02
6 · The paper itself

Abstract

Craniofacial birth defects, such as cleft lip and palate, are among the most common congenital anomalies and often arise from disruptions in early facial patterning. Many of these defects are linked to environmental teratogens, yet such exposures cannot be directly evaluated in humans, making animal models essential for evaluating developmental risks. Xenopus laevis offers a powerful solution: its tadpoles develop externally, share deeply conserved craniofacial patterning mechanisms with humans, and provide an accessible platform for uncovering how environmental exposures reshape facial structures during development. Here, we present the XenCart Protocol, a reproducible workflow for Alcian blue staining and quantitative morphometric analysis of Xenopus craniofacial cartilage. This method provides clear visualization of individual cartilage elements and can be readily applied to investigate genetic or environmental perturbations. The Xenopus craniofacial skeleton contains distinct cartilaginous structures that perform key biomechanical functions and share strong homology with regions of the human craniofacial skeleton. These similarities allow direct comparison of developmental outcomes across vertebrates. As part of a Course-based Undergraduate Research Experience (CURE), the XenCart Protocol was used to measure jaw cartilage dimensions in tadpoles exposed to an emerging teratogen, e-liquids were used in vaping. X. laevis embryos exposed to e-liquid showed reductions across the major craniofacial cartilages, along with altered cartilage proportions. Together, these changes are consistent with an overall reduction in facial size and altered craniofacial shape. These findings also pinpoint the precise regions of the jaw most affected by e-liquid exposure, providing a foundation for uncovering the developmental mechanisms driving these craniofacial changes. The ability to detect clear differences in specific structures shows that the protocol is sensitive and well suited for student-led research. In summary, the XenCart Protocol provides a standardized, scalable method for quantifying craniofacial cartilage development and offers a powerful platform for both mechanistic research and undergraduate training in developmental biology and toxicology.

Indexed as

Alcian blueanatomy educationcraniofacial cartilagedevelopmental anatomygeometric morphometricsteratologyXenopus laevis

Identifiers

PMID42703013
PMCPMC13547940

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.