Evidence map›Paper›PMID 42700195›Full record

ArticleMolecular biology reports2026

Genomic diversity and resistance determinants of staphylococci from cow and buffalo milk.

Jaydeep Banerjee, Sk Masud Karim, Deepjyoti Sharma, Barnan Choudhury, Suman Biswas, Indranil Samanta, Pramod K Nanda, Tapas K Biswas, M Suman Kumar, Premanshu Dandapat and 2 more

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Article in Molecular biology reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

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12 authors.

Jaydeep Banerjee *ICAR-Indian Veterinary Research Institute, Eastern Regional Station, 37 Belgachia Road, Kolkata, 700 037, West Bengal, India.
Sk Masud Karim *West Bengal University of Animal and Fishery Sciences, Kshudiram Bose Sarani, 37 & 68, Belgachia, Kolkata, 700 037, West Bengal, India.
Deepjyoti Sharma *West Bengal University of Animal and Fishery Sciences, Kshudiram Bose Sarani, 37 & 68, Belgachia, Kolkata, 700 037, West Bengal, India.
Barnan ChoudhuryICAR-Indian Veterinary Research Institute, Eastern Regional Station, 37 Belgachia Road, Kolkata, 700 037, West Bengal, India.
Suman BiswasWest Bengal University of Animal and Fishery Sciences, Kshudiram Bose Sarani, 37 & 68, Belgachia, Kolkata, 700 037, West Bengal, India.
Indranil SamantaWest Bengal University of Animal and Fishery Sciences, Kshudiram Bose Sarani, 37 & 68, Belgachia, Kolkata, 700 037, West Bengal, India.
Pramod K NandaICAR-Indian Veterinary Research Institute, Eastern Regional Station, 37 Belgachia Road, Kolkata, 700 037, West Bengal, India.
Tapas K BiswasICAR-Indian Veterinary Research Institute, Eastern Regional Station, 37 Belgachia Road, Kolkata, 700 037, West Bengal, India.
M Suman KumarICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, 243 122, Uttar Pradesh, India.
Premanshu DandapatICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, 243 122, Uttar Pradesh, India.
Arnab SenICAR-Indian Veterinary Research Institute, Eastern Regional Station, 37 Belgachia Road, Kolkata, 700 037, West Bengal, India.
Samiran BandyopadhyayICAR-Indian Veterinary Research Institute, Eastern Regional Station, 37 Belgachia Road, Kolkata, 700 037, West Bengal, India. samiranvet@gmail.com.

Funding

Indian Council of Agricultural Research AINP on AMR
6 · The paper itself

Abstract

backgroundStaphylococci are important mastitis pathogens in dairy animals and serve as reservoirs of antimicrobial resistance genes (ARGs) having zoonotic potential. Genomic characterization of resistant isolates is essential to understand their diversity, resistance mechanisms, and One Health implications. METHODS AND

resultsA total of 363 cow and buffalo milk samples-including 108 from animals with mastitis-were screened, yielding 98 staphylococcal isolates, comprising 20 Staphylococcus aureus and 78 coagulase-negative staphylococci (CoNS). Antimicrobial susceptibility testing revealed resistance to cefoxitin (CoNS: 21.7%; S. aureus: 10%), tetracycline (CoNS: 19.2%; S. aureus: 10%), erythromycin (CoNS:16.7%; S. aureus: 10%), gentamicin (CoNS: 10.2%; S. aureus: 10%) and fluoroquinolone (CoNS: 10.2%), while the majority were sensitive to chloramphenicol, cotrimoxazole (~ 95%, each), linezolid (~ 97%), and vancomycin (100%). Nineteen isolates, including two S. aureus, were cefoxitin-resistant, and eight carried the mecA gene. Whole genome sequencing of these eight isolates revealed genome sizes ranging from 2.27 to 2.78 MB, with the methicillin resistant S. aureus (MRSA, ERSST98) isolate possessing the largest genome and the highest rRNA copy number. Comparative genomic analysis revealed various SCCmec types along with an extensive array of resistance determinants, encompassing aminoglycosides, macrolides, tetracyclines, efflux systems, and heavy metals, underscoring the multifaceted resistance repertoire of these strains. Virulence profiling of ERSST98 demonstrated a broad arsenal of adhesins, toxins, and biofilm‑associated genes, highlighting its pathogenic capacity. Mobile genetic elements with diverse plasmid replicons and insertion sequence families further contributed to genomic plasticity.

conclusionsCollectively, this study underscores the genomic diversity of methicillin-resistant staphylococci from dairy animals with extensive resistance determinants and highlights their zoonotic relevance within One Health framework.

Indexed as

MilkStaphylococcusAnimalsAnti-Bacterial AgentsBuffaloesCattleDrug Resistance, BacterialDrug Resistance, Multiple, BacterialFemaleGenetic VariationGenome, BacterialMicrobial Sensitivity TestsStaphylococcal InfectionsStaphylococcus aureusWhole Genome SequencingAnti-Bacterial AgentsMastitisMilkMRCoNSMRSAWhole genome sequencing (WGS)

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.