Evidence map›Paper›PMID 42697963›Full record

ArticleThe EMBO journal2026

KDM6A loss enhances oxidative phosphorylation uncovering tissue-level convergent evolution.

Antonino Alex Cartalemi, Dalia Rosano, Camilla Ferrari, Gemma Crupi, Laura Cassina, Guido Gatti, Federica Corigliano, Simona Punzi, Ilaria Villanti, Daphné Dupéré-Richer and 16 more

Abstract read
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Article in The EMBO journal, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

Antonino Alex CartalemiFunctional Genomics of Cancer Unit, Comprehensive Cancer Center, IRCCS San Raffaele Scientific Institute, Milan, Italy.ORCID http://orcid.org/0000-0003-1523-4443
Dalia Rosano *Functional Genomics of Cancer Unit, Comprehensive Cancer Center, IRCCS San Raffaele Scientific Institute, Milan, Italy.
Camilla Ferrari *Functional Genomics of Cancer Unit, Comprehensive Cancer Center, IRCCS San Raffaele Scientific Institute, Milan, Italy.ORCID http://orcid.org/0009-0007-1643-8102
Gemma CrupiFunctional Genomics of Cancer Unit, Comprehensive Cancer Center, IRCCS San Raffaele Scientific Institute, Milan, Italy.
Laura CassinaCystic Kidney Disorders Unit, Genetics and Cell Biology Division, IRCCS San Raffaele Scientific Institute, Milan, Italy.ORCID http://orcid.org/0000-0002-7350-3069
Guido GattiFunctional Genomics of Cancer Unit, Comprehensive Cancer Center, IRCCS San Raffaele Scientific Institute, Milan, Italy.
Federica CoriglianoFunctional Genomics of Cancer Unit, Comprehensive Cancer Center, IRCCS San Raffaele Scientific Institute, Milan, Italy.ORCID http://orcid.org/0000-0003-4331-8353
Simona PunziFunctional Genomics of Cancer Unit, Comprehensive Cancer Center, IRCCS San Raffaele Scientific Institute, Milan, Italy.
Ilaria VillantiFunctional Genomics of Cancer Unit, Comprehensive Cancer Center, IRCCS San Raffaele Scientific Institute, Milan, Italy.
Daphné Dupéré-RicherDepartment of Epigenetics, Van Andel Institute, Grand Rapids, MI, USA.
Chiara D'ErcoleDepartment of Anatomical, Histological, Forensic Sciences and Orthopedics, Sapienza University of Rome, Rome, Italy.ORCID http://orcid.org/0000-0003-0077-9870
Veronica RuggieriDepartment of Anatomical, Histological, Forensic Sciences and Orthopedics, Sapienza University of Rome, Rome, Italy.ORCID http://orcid.org/0009-0009-2243-3804
Annarita MiluzioIstituto Nazionale di Genetica Molecolare, INGM, "Romeo ed Enrica Invernizzi", Milan, Italy.
Tiziana BrunoGene Expression and Cancer Models Unit, Department of Research and Advanced Technologies Translational Research Area, IRCCS Regina Elena National Cancer Institute, Rome, Italy.
Jose Manuel Garcia ManteigaCenter for Omics Sciences, IRCCS San Raffaele Scientific Institute, Milan, Italy.ORCID http://orcid.org/0000-0002-5481-040X
Valentina GiansantiCenter for Omics Sciences, IRCCS San Raffaele Scientific Institute, Milan, Italy.
Richard L BennettDepartment of Epigenetics, Van Andel Institute, Grand Rapids, MI, USA.ORCID http://orcid.org/0000-0002-0243-2443
Davide CittaroCenter for Omics Sciences, IRCCS San Raffaele Scientific Institute, Milan, Italy.ORCID http://orcid.org/0000-0003-0384-3700
Luca MadaroDepartment of Anatomical, Histological, Forensic Sciences and Orthopedics, Sapienza University of Rome, Rome, Italy.
Alessandra BolettaCystic Kidney Disorders Unit, Genetics and Cell Biology Division, IRCCS San Raffaele Scientific Institute, Milan, Italy.ORCID http://orcid.org/0000-0002-4704-4006
Telmo PievaniDepartment of Biology, University of Padua, Padua, Italy.
Stefano BiffoIstituto Nazionale di Genetica Molecolare, INGM, "Romeo ed Enrica Invernizzi", Milan, Italy.ORCID http://orcid.org/0000-0002-3780-1050
Maurizio FanciulliGene Expression and Cancer Models Unit, Department of Research and Advanced Technologies Translational Research Area, IRCCS Regina Elena National Cancer Institute, Rome, Italy.ORCID http://orcid.org/0000-0002-5281-4191
Michele CiboddoFunctional Genomics of Cancer Unit, Comprehensive Cancer Center, IRCCS San Raffaele Scientific Institute, Milan, Italy.
Jonathan LichtDepartment of Epigenetics, Van Andel Institute, Grand Rapids, MI, USA.
Giovanni TononFunctional Genomics of Cancer Unit, Comprehensive Cancer Center, IRCCS San Raffaele Scientific Institute, Milan, Italy. tonon.giovanni@hsr.it.ORCID http://orcid.org/0000-0003-2973-5038

Funding

UTX, MLL AND PATHOGENIC DEREGULATION OF HISTONE METHYLATION IN MULTIPLE MYELOMAR01CA180475 · NCI · UNIVERSITY OF FLORIDA · PI LICHT, JONATHAN D. · 2014 to 2020
$1.8M
Investigating epigenetic mechanisms of cancerR50CA293837 · NCI · VAN ANDEL RESEARCH INSTITUTE · PI Richard L Bennett · 2024 to 2026
$528k
Fondazione AIRC per la ricerca sul cancro ETS (AIRC) 26728-202Fondazione AIRC per la ricerca sul cancro ETS (AIRC) IG 28987Fondazione Cariplo (Cariplo Foundation) 2017-0653HHS | National Institutes of Health (NIH) R50CA293837HHS | NIH | NCI | Center for Cancer Research (CCR) R01CA180475Leukemia and Lymphoma Society (LLS) 7037-25Multiple Myeloma Research Foundation (MMRF) P0003055Myeloma Solutions Fund MSF-005NCI NIH HHS R01 CA180475NCI NIH HHS R50 CA293837
6 · The paper itself

Abstract

The tumor suppressor KDM6A/UTX, a histone demethylase and a 2-oxoglutarate-dependent dioxygenase, is frequently lost in many cancer types. We show that KDM6A loss pervasively activates oxidative phosphorylation in several solid tumors, generating a pseudo-hyperoxic environment, opposite from the pseudo-hypoxia observed in VHL-mutated renal carcinomas. Mechanistically, KDM6A sustains the expression of the coil-coil domain gene CCDC3, which inhibits CREB1-driven transcription of the mitochondrial regulator PPARGC1A. In the hematological cancer multiple myeloma where KDM6A is frequently deleted, its loss similarly promotes oxidative phosphorylation, but via an alternative mechanism: the increased transfer of mitochondria from stromal to myeloma cells via tunneling nanotubes, triggered by the loss of the mTORC1 inhibitor TRAF3IP3. Beyond cancer, KDM6A regulates oxidative phosphorylation also during development and in adult tissues, engaging either the CCDC3-CREB1 or the TRAF3IP3-mTORC1 pathways. These mutually exclusive associations suggest a tissue-level convergent evolution, positioning KDM6A as a central modulator of mitochondrial activity through context-specific partners.

Indexed as

Histone DemethylasesNuclear ProteinsOxidative PhosphorylationAnimalsHumansMechanistic Target of Rapamycin Complex 1Metabolic ReprogrammingMitochondriaPeroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaHistone DemethylasesKDM6A protein, humanMechanistic Target of Rapamycin Complex 1Nuclear ProteinsPeroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaPPARGC1A protein, human

Identifiers

PMID42697963
PMCPMC13631268

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.