Evidence map›Paper›PMID 42692913›Full record

ReviewTrends in parasitology2026

New insights on Plasmodium gene expression from direct RNA sequencing.

Janne Grünebast, David Serre

Abstract readReview
In one paragraph

Review in Trends in parasitology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Janne GrünebastInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA.
David SerreInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA. Electronic address: DSerre@som.umaryland.edu.

Funding

Characterization of Plasmodium falciparum long non-coding RNAs and their roles in gene regulationR21AI194421 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI LLINAS, MANUEL, SERRE, DAVID · 2025 to 2025
$445k
NIAID NIH HHS R21 AI194421
6 · The paper itself

Abstract

Oxford Nanopore Technology (ONT) direct RNA sequencing enables the sequencing of native RNA molecules without cDNA conversion. The long-read approach captures full-length reads spanning entire genes and has transformed the study of gene expression in Plasmodium parasites by enabling analysis of untranslated regions, isoforms, and alternative splicing. In addition, ONT provides unique insights into non-coding RNAs, RNA modifications, and polyadenylated tail dynamics, which are expanding our understanding of post-transcriptional regulation in Plasmodium, including processes beyond translational repression in gametocytes and sporozoites. Here, we discuss the past and future applications of direct RNA sequencing in Plasmodium research and highlight its advantages, limitations, and future prospects.

Indexed as

gene regulationisoformsmalarianon-coding RNAsOxford Nanopore Technology

Identifiers

PMID42692913
PMCPMC13559545

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.