Evidence map›Paper›PMID 42690552›Full record

ArticleAnalytical sciences : the international journal of the Japan Society for Analytical Chemistry2026

An integrated extraction-free LAMP platform with colorimetric, real-time, and immunochromatographic strip detection for rapid male-specific DNA screening in forensic triage.

Yebin Kim, Jiwoo Choi, Yujin Oh, Eunbyeol Kim, Hakrae Lee, Yeju Kim, Hokwon Choi, Yeonwoo Lee, Kyunghyeon Kwak, Si-Keun Lim

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Article in Analytical sciences : the international journal of the Japan Society for Analytical Chemistry, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Yebin KimDepartment of Forensic Sciences, Graduate School of Sungkyunkwan University, 2066, Seoburo, Jangan-gu, Suwon, 16149, Republic of Korea.
Jiwoo ChoiResearch and Development Team, Attoplex Inc, 45, Jojeong-daero, Hanam-si, 12918, Gyeonggi-do, Republic of Korea.
Yujin OhDepartment of Forensic Sciences, Graduate School of Sungkyunkwan University, 2066, Seoburo, Jangan-gu, Suwon, 16149, Republic of Korea.
Eunbyeol KimDepartment of Forensic Sciences, Graduate School of Sungkyunkwan University, 2066, Seoburo, Jangan-gu, Suwon, 16149, Republic of Korea.
Hakrae LeeDepartment of Forensic Sciences, Graduate School of Sungkyunkwan University, 2066, Seoburo, Jangan-gu, Suwon, 16149, Republic of Korea.
Yeju KimResearch and Development Team, Attoplex Inc, 45, Jojeong-daero, Hanam-si, 12918, Gyeonggi-do, Republic of Korea.
Hokwon ChoiDepartment of Forensic Sciences, Graduate School of Sungkyunkwan University, 2066, Seoburo, Jangan-gu, Suwon, 16149, Republic of Korea.
Yeonwoo LeeDepartment of Forensic Sciences, Graduate School of Sungkyunkwan University, 2066, Seoburo, Jangan-gu, Suwon, 16149, Republic of Korea.
Kyunghyeon KwakDepartment of Forensic Sciences, Graduate School of Sungkyunkwan University, 2066, Seoburo, Jangan-gu, Suwon, 16149, Republic of Korea.
Si-Keun LimDepartment of Forensic Sciences, Graduate School of Sungkyunkwan University, 2066, Seoburo, Jangan-gu, Suwon, 16149, Republic of Korea. sikeun.lim@skku.edu.ORCID http://orcid.org/0000-0003-4246-6223

Funding

Korea Basic Science Institute 2020R1A6C101A191Korean National Police Agency PR10-01-000-21
6 · The paper itself

Abstract

Rapid identification of male-derived biological evidence enhances forensic casework efficiency, particularly in sexual assault investigations that require prioritization of male DNA for downstream short tandem repeat (STR) analysis. Here, we present an extraction-free direct loop-mediated isothermal amplification (LAMP) workflow targeting the Y-chromosomal sex-determining region Y (SRY) gene for male-specific DNA detection, with the autosomal human leukocyte antigen DRA (HLA-DRA) gene incorporated as a human-specific internal control. Three detection formats were systematically evaluated within a single extraction-free framework: colorimetric LAMP enabled visual SRY detection within 30 min at 65 °C; multiplex real-time LAMP simultaneously detected both SRY and HLA-DRA within 15 min, achieving limits of detection of 100 pg per reaction for male DNA and 10 pg per reaction for total human DNA; and an immunochromatographic strip (ICS)-based format provided instrument-free visual discrimination between male, female, and non-human samples through simultaneous dual-target readout on a single strip. To assess field applicability, five direct lysis reagents were evaluated for compatibility with each detection modality. Nuclease-free water preserved the pH conditions required for colorimetric detection, enabling reliable male DNA identification from whole blood diluted up to 1:25 and saliva diluted up to 1:5. NaOH-based lysis improved DNA release and amplification kinetics in real-time LAMP, enabling detection from blood diluted up to 1:125 and saliva diluted up to 1:625. A UDG/dUTP anti-contamination system was optimized for the ICS format to suppress carry-over-derived false-positive signals while maintaining robust visual band intensity-an essential requirement for reliable point-of-care interpretation. The optimized workflow was validated across multiple forensically relevant matrices including whole blood, saliva, swab-collected samples, and cigarette butt mock evidence, consistently discriminating male- from female-derived biological material. These results demonstrate that direct LAMP, when paired with appropriate lysis chemistry and detection modality, provides a rapid, sensitive, and operationally practical strategy for on-site male DNA screening and forensic evidence triage.

Indexed as

Colorimetric detectionDirect lysisExtraction-free amplificationForensic sample triageHuman leukocyte antigen DRA (HLA-DRA)Immunochromatographic strip (ICS)Loop-mediated isothermal amplification (LAMP)Male-specific DNA detectionPoint-of-need diagnosticsSex-determining region Y (SRY)

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.