Evidence map›Paper›PMID 42685201›Full record

ArticleScience advances2026

Mechanical cues of an interpenetrating polysaccharide matrix regulate self-assembly of collagen fibers.

Fatemeh Tavakoli Joorabi, Nicholas J Derr, Zecheng Li, Bryan A Nerger, Chris H Rycroft, David J Mooney, Kyle H Vining

Abstract read
In one paragraph

Article in Science advances, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Fatemeh Tavakoli JoorabiDepartment of Materials Science and Engineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0003-0395-2894
Nicholas J DerrMassachusetts Institute of Technology, Cambridge, MA 02138, USA.ORCID 0000-0002-6785-9122
Zecheng LiDepartment of Bioengineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, PA 19104, USA.
Bryan A NergerJohn A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA 02138, USA.
Chris H RycroftDepartment of Mathematics, University of Wisconsin-Madison, Madison, WI 53706, USA.ORCID 0000-0003-4677-6990
David J MooneyJohn A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA 02138, USA.ORCID 0000-0001-6299-1194
Kyle H ViningDepartment of Materials Science and Engineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0002-4009-879X

Funding

Immuno-mechanical regulation of monocytes in fibrotic nichesR35GM157079 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI Kyle Holmberg Vining · 2025 to 2026
$813k
Targeting mechanical regulation of monocyte fate in head and neck cancer.R00DE030084 · NIDCR · UNIVERSITY OF PENNSYLVANIA · PI VINING, KYLE HOLMBERG · 2022 to 2024
$747k
NIDCR NIH HHS L70 DE035343NIDCR NIH HHS R00 DE030084NIGMS NIH HHS R35 GM157079
6 · The paper itself

Abstract

Collagen molecules self-assemble into supramolecular fibers within a molecularly crowded, polysaccharide-rich extracellular matrix (ECM) that has fluid-like, viscoelastic properties. Here, we determine that the viscoelasticity of alginate networks regulates the assembly of type I collagen fibers. The viscoelasticity and shear moduli of the alginate network were tuned by the polymer weight percentage and degree of cooperative ionic and covalent norbornene-tetrazine cross-linking. Stepwise shear strain applied to covalently cross-linked hydrogels generated higher stress than in ionic hydrogels. Hydrogels with reduced viscoelasticity also showed reduced water permeability. Second-harmonic generation confocal imaging revealed that decreasing viscoelasticity significantly suppressed collagen fiber self-assembly. Simulations demonstrated mechanical coupling between the hydrogel network and the aggregate size of collagen molecules, which was consistent with experimental results showing impaired rate and magnitude of self-assembly in covalently cross-linked networks. These results provide a framework for understanding how ECM mechanical properties can influence the assembly and organization of fibrillar macromolecules.

Indexed as

CollagenCollagen Type IExtracellular MatrixPolysaccharidesAlginatesAnimalsCross-Linking ReagentsElasticityHydrogelsViscosityAlginatesCollagenCollagen Type ICross-Linking ReagentsHydrogelsPolysaccharides

Identifiers

PMID42685201
PMCPMC13537267

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.