Evidence map›Paper›PMID 42685094›Full record

ArticlePLoS genetics2026

Post-transcriptional regulation of Profilin-2 by microRNAs and RNA-binding proteins forms a critical regulatory node for early embryonic cell fate decisions.

Carolyn Sangokoya, Isabella R Rosso, Rana Ghandehari-Alavijeh, Robert Blelloch

Abstract read
In one paragraph

Article in PLoS genetics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Carolyn SangokoyaDepartment of Pathology, University of California, San Francisco, San Francisco, California, United States of America.ORCID https://orcid.org/0000-0002-9731-3446
Isabella R RossoDepartment of Pathology, University of California, San Francisco, San Francisco, California, United States of America.ORCID https://orcid.org/0009-0002-3443-3667
Rana Ghandehari-AlavijehDepartment of Pathology, University of California, San Francisco, San Francisco, California, United States of America.
Robert BlellochDepartment of Pathology, University of California, San Francisco, San Francisco, California, United States of America.

Funding

UCSF Liver Core CenterP30DK026743 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Holger Willenbring · 1986 to 2026
$30.7M
Research BaseP30DK063720 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GERMAN, MICHAEL S · 2003 to 2019
$21.8M
Rewiring of the pluripotency enhancer network during early mammalian developmentR01GM122439 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BLELLOCH, ROBERT · 2017 to 2020
$1.7M
Iteratively redefining developmental potential through poised enhancersR01GM125089 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BLELLOCH, ROBERT · 2017 to 2020
$1.5M
POST-TRANSCRIPTIONAL REGULATION OF CELL FATE IN EARLY MAMMALIAN DEVELOPMENTK08HD105017 · NICHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SANGOKOYA, CAROLYN O · 2021 to 2025
$712k
Illumina NovaSeq 6000 Sequencing SystemS10OD028511 · OD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHOW, ERIC D · 2020 to 2020
$583k
NICHD NIH HHS K08 HD105017NIDDK NIH HHS P30 DK026743NIDDK NIH HHS P30 DK063720NIGMS NIH HHS R01 GM122439NIGMS NIH HHS R01 GM125089NIH HHS S10 OD028511
6 · The paper itself

Abstract

Post-transcriptional control by RNA binding proteins (RBPs) and microRNAs play central roles in mRNA stability and translation, yet how RBPs and microRNAs coordinate in developmental time to regulate cell fate remains poorly understood. Here, we demonstrate that post-transcriptional regulation of the Profilin 2 (Pfn2) transcript is essential for differentiation of embryonic stem cells (ESCs) into the primary germ layer lineages. The Pfn2 3'untranslated region has both an Iron Regulatory Protein binding site (IRE) and a nearby binding site for ESC enriched microRNAs. Deletion of this microRNA site leads to increased PFN2 and reduced FGF signaling during pluripotency transition prior to germ layer formation. In contrast, deletion of the IRE leads to decreased PFN2, a Wnt signaling defect, reduced nuclear beta-catenin, and a subsequent block in mesendodermal lineages during early germ layer formation. We further find that loss of the IRE site results in a cell autonomous defect in Wnt signaling and mesendodermal differentiation. The IRE site acts to stabilize beta-catenin, as disruption of the site leads to reduced nuclear beta-catenin levels. Together, these findings reveal the Pfn2 microRNA-IRE regulatory axis as a critical post-transcriptional regulatory node governing the switch from pluripotency to somatic differentiation.

Indexed as

Cell DifferentiationEmbryonic Stem CellsMicroRNAsProfilinsRNA-Binding Proteins3' Untranslated RegionsAnimalsbeta CateninBinding SitesCell LineageGene Expression Regulation, DevelopmentalMiceWnt Signaling Pathway3' Untranslated Regionsbeta CateninMicroRNAsProfilinsRNA-Binding Proteins

Identifiers

PMID42685094
PMCPMC13537575

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.