Evidence map›Paper›PMID 42684560›Full record

ArticleWorld journal of microbiology & biotechnology2026

Culture conditions and microbial interactions shape VOC profiles and reveal 6-pentyl-α-pyrone and 2-oxindole as modulators of Colletotrichum gloeosporioides growth and pathogenicity.

Paula Itzel Bautista-Ortega, Irving Hernández-Hernández, José Luis Ávila-Oviedo, Lourdes Iveth Macías-Rodríguez, Lizeth Yazmín Soria-Leal, Rubén Pérez-Pérez, Mauricio Nahuam Chávez-Avilés

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Article in World journal of microbiology & biotechnology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Paula Itzel Bautista-OrtegaLaboratorio de Bioquímica y Biología Molecular, División de Ingeniería Bioquímica, Tecnológico Nacional de México/ITS de Ciudad Hidalgo, Hidalgo, 61100, México.
Irving Hernández-HernándezLaboratorio de Bioquímica y Biología Molecular, División de Ingeniería Bioquímica, Tecnológico Nacional de México/ITS de Ciudad Hidalgo, Hidalgo, 61100, México.
José Luis Ávila-OviedoLaboratorio de Bioquímica y Biología Molecular, División de Ingeniería Bioquímica, Tecnológico Nacional de México/ITS de Ciudad Hidalgo, Hidalgo, 61100, México.
Lourdes Iveth Macías-RodríguezLaboratorio de Bioquímica Ecológica, Instituto de Investigaciones Químico-Biológicas, Universidad Michoacana de San Nicolás de Hidalgo, Morelia, 58030, México.
Lizeth Yazmín Soria-LealLaboratorio de Bioquímica y Biología Molecular, División de Ingeniería Bioquímica, Tecnológico Nacional de México/ITS de Ciudad Hidalgo, Hidalgo, 61100, México.
Rubén Pérez-PérezLaboratorio de Bioquímica y Biología Molecular, División de Ingeniería Bioquímica, Tecnológico Nacional de México/ITS de Ciudad Hidalgo, Hidalgo, 61100, México.
Mauricio Nahuam Chávez-AvilésLaboratorio de Bioquímica y Biología Molecular, División de Ingeniería Bioquímica, Tecnológico Nacional de México/ITS de Ciudad Hidalgo, Hidalgo, 61100, México. nchavez@cdhidalgo.tecnm.mx.ORCID https://orcid.org/0000-0002-6588-6653

Funding

Secretaría de Educación Pública DSA/103.5/15/10775Tecnológico Nacional de México 17411.23-PD
6 · The paper itself

Abstract

Colletotrichum gloeosporioides, the causal agent of anthracnose, significantly reduces the productivity of high-value crops, and volatile organic compounds (VOCs) are gaining attention as a disease-management approach. This study assessed how nutrient sources and microbial interaction systems shape VOC-mediated antagonism against C. gloeosporioides. Culture medium strongly affected antifungal performance, with Luria-Bertani (LB) promoting up to a 4.28-fold increase in inhibition compared with Potato Dextrose Agar (PDA). Interaction systems also shaped antagonism: bipartite systems generated up to 1.31-fold stronger inhibition than tripartite systems. Volatilome profiling of bipartite interactions involving Trichoderma strains (T1, T2, T3) and Bacillus subtilis (Bs) revealed distinct VOC signatures. Isopropyl alcohol, 6-pentyl-α-pyrone (6PP), 2-oxindole (2OI), dimethyl disulfide, 2-pentylfuran, and α-phellandrene were assessed individually; 6PP and 2OI showed the strongest inhibition, reaching 43%. While 6PP is a well-established antifungal VOC, 2OI has not been previously reported as a natural antifungal volatile metabolite, making this study the first to provide functional evidence of its inhibitory role. Combined application of 6PP and 2OI at 125 µM each maintained inhibition, suggesting a concentration-sparing effect, whereas half-concentrations produced additive inhibition, comparable to that of the individual treatments. In avocado leaf assays, low VOC concentrations increased disease severity despite reducing in vitro growth, whereas higher concentrations reduced lesion development and colonization by 30-50%. At 1000 µM, 2OI significantly inhibited hyphal growth and sporulation. These findings demonstrate that media composition and microbial interactions modulate VOC production and that specific VOC can suppress fungal growth and pathogenicity, highlighting their potential for sustainable anthracnose management.

Indexed as

ColletotrichumIndolesMicrobial InteractionsVolatile Organic CompoundsAntifungal AgentsBacillus subtilisCulture MediaFuransPlant DiseasesPyronesTrichodermaVirulence2-pentylfuran6-pentylpyroneAntifungal AgentsCulture MediaFuransIndolesPyronesVolatile Organic CompoundsAntifungal metabolitesBacillus subtilisBiocontrol mechanismsSparing effectTrichoderma sp.Virulence modulationVolatilome analyses

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.