Evidence map›Paper›PMID 42681516›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2026

Simultaneous Visualization of NEAT1_2 and Paraspeckle Proteins by Sequential RNA-FISH and Immunofluorescence.

Joonwoo Lee, Youngdae Gwon

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Article in Methods in molecular biology (Clifton, N.J.), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Joonwoo LeeDepartment of Molecular Cell Biology, Sungkyunkwan University School of Medicine, Suwon, Republic of Korea.
Youngdae GwonDepartment of Molecular Cell Biology, Sungkyunkwan University School of Medicine, Suwon, Republic of Korea. ygwon@skku.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Paraspeckles are membrane-less subnuclear assemblies whose organization depends on the long isoform of nuclear paraspeckle assembly transcript 1 (NEAT1_2), which scaffolds paraspeckle proteins into a core-shell architecture. Disruption of the layered structure within paraspeckles occurs when paraspeckle components are depleted, potentially leading to functional impairment. Here, we describe a protocol for simultaneous visualization of NEAT1_2 middle region and transactive response DNA-binding protein 43 (TDP-43), which are enriched in paraspeckle core and shell, respectively, in U2OS human osteosarcoma cells. Sequential RNA-fluorescence in situ hybridization (RNA-FISH) and immunofluorescence, combined with high-resolution confocal microscopy, enable delineation of the paraspeckle core-shell structure. This method provides a robust approach for probing paraspeckle remodeling across diverse biological conditions.

Indexed as

Fluorescent Antibody TechniqueIn Situ Hybridization, FluorescenceParaspecklesRNA, Long NoncodingCell Line, TumorDNA-Binding ProteinsHumansMicroscopy, ConfocalOsteosarcomaRNA-Binding ProteinsDNA-Binding ProteinsNEAT1 long non-coding RNA, humanRNA-Binding ProteinsRNA, Long NoncodingCore–shell structureIFNEAT1NONOParaspeckleRNA-FISHTDP-43

Identifiers

PMID42681516

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.