Evidence map›Paper›PMID 42681235›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2026

Biomechanical Studies with Xenopus Animal Caps: A 3D-Printed Mechanical Bracket for Maintaining Tissue Stretch During Immunofluorescence Analysis.

Irwin Phanada, Raphael Thuret, Sarah Woolner

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Article in Methods in molecular biology (Clifton, N.J.), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Irwin PhanadaManchester Cell-Matrix Centre, Division of Cell Matrix Biology and Regenerative Medicine, Faculty of Biology, Medicine and Health, Michael Smith Building, University of Manchester, Oxford Road, Manchester, M13 9PT, UK.
Raphael ThuretManchester Cell-Matrix Centre, Division of Cell Matrix Biology and Regenerative Medicine, Faculty of Biology, Medicine and Health, Michael Smith Building, University of Manchester, Oxford Road, Manchester, M13 9PT, UK.
Sarah WoolnerManchester Cell-Matrix Centre, Division of Cell Matrix Biology and Regenerative Medicine, Faculty of Biology, Medicine and Health, Michael Smith Building, University of Manchester, Oxford Road, Manchester, M13 9PT, UK. Sarah.Woolner@manchester.ac.uk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mechanical forces are central regulators of embryonic morphogenesis, influencing cell division, migration, and fate decisions. The amphibian model Xenopus laevis provides a tractable system for dissecting mechanotransduction pathways, yet existing approaches to apply reproducible force to animal cap tissues are limited by reliance on expensive custom-built devices and the inability to preserve tissue deformation during multiday immunofluorescence protocols. Here, we present a method for applying and maintaining stretch in X. laevis animal caps using a low-cost, 3D-printed mechanical bracket. This device locks explants in a stretched state throughout fixation, staining, clearing, and imaging, thereby maintaining key features, such as cell geometry, which are lost if the stretched state is released. We describe the design and assembly of the bracket, preparation of elastomeric Polydimethylsiloxane (PDMS) membranes, embryo collection and dissection, and protocols for stretching, fixation, and volumetric immunofluorescence imaging. This approach enables high-resolution analysis of force-dependent molecular and cellular processes, while lowering technical barriers for mechanobiology research. By preserving tissue geometry during complex workflows, the method expands the utility of X. laevis animal caps as a versatile platform for studying how mechanical cues shape developing tissues.

Indexed as

Fluorescent Antibody TechniquePrinting, Three-DimensionalXenopus laevisAnimalsBiomechanical PhenomenaDimethylpolysiloxanesEmbryo, NonmammalianMechanotransduction, CellularbaysilonDimethylpolysiloxanes3D-printed bracketAnimal capImmunofluorescenceTissue stretchVolumetric imagingXenopus laevis

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.