Evidence map›Paper›PMID 42671377›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2026

Switching Spike Plasticity Shapes ACE2 Engagement Across SARS-CoV-2 Variants.

Sarah Stainer, Rong Zhu, Manuel Reithofer, Gerhard Stadlmayr, Katharina Stadlbauer, Panchika Prangkio, Christoph Rippel, Markus Hahn, Aniko Eva Kasztner, Stefanie Stohl and 8 more

Abstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Sarah Stainer *Institute of Biophysics, Johannes Kepler University Linz, Linz, Austria.ORCID https://orcid.org/0009-0006-3620-0831
Rong Zhu *Institute of Biophysics, Johannes Kepler University Linz, Linz, Austria.ORCID https://orcid.org/0000-0001-7553-7249
Manuel Reithofer *Department of Biotechnology and Food Science, Institute of Molecular Biotechnology, BOKU University, Vienna, Austria.ORCID https://orcid.org/0000-0003-2845-1826
Gerhard StadlmayrDepartment of Biotechnology and Food Science, Institute of Molecular Biotechnology, BOKU University, Vienna, Austria.ORCID https://orcid.org/0000-0001-5720-8759
Katharina StadlbauerDepartment of Biotechnology and Food Science, Institute of Molecular Biotechnology, BOKU University, Vienna, Austria.ORCID https://orcid.org/0000-0002-0724-5874
Panchika PrangkioDepartment of Chemistry, Faculty of Science, Chiang Mai University, Chiang Mai, Thailand.ORCID https://orcid.org/0000-0002-6376-7116
Christoph RippelInstitute of Biophysics, Johannes Kepler University Linz, Linz, Austria.
Markus HahnInstitute of Biophysics, Johannes Kepler University Linz, Linz, Austria.
Aniko Eva KasztnerDepartment of Biotechnology and Food Science, Institute of Molecular Biotechnology, BOKU University, Vienna, Austria.
Stefanie StohlDepartment of Biotechnology and Food Science, Institute of Molecular Biotechnology, BOKU University, Vienna, Austria.
Petr BednarVeterinary Research Institute, Brno, Czech Republic.ORCID https://orcid.org/0000-0003-4924-3663
Daniel RuzekVeterinary Research Institute, Brno, Czech Republic.ORCID https://orcid.org/0000-0003-4655-2380
David GlückInstitute of Biochemistry, Biocenter, Goethe University Frankfurt, Frankfurt, Germany.ORCID https://orcid.org/0000-0003-3983-1277
Robert TampéInstitute of Biochemistry, Biocenter, Goethe University Frankfurt, Frankfurt, Germany.ORCID https://orcid.org/0000-0002-0403-2160
Gordana Wozniak-KnoppDepartment of Biotechnology and Food Science, Institute of Molecular Biotechnology, BOKU University, Vienna, Austria.ORCID https://orcid.org/0000-0002-4069-070X
Yoo Jin OhInstitute of Biophysics, Johannes Kepler University Linz, Linz, Austria.ORCID https://orcid.org/0000-0002-9636-3329
Miriam KlausbergerDepartment of Biotechnology and Food Science, Institute of Molecular Biotechnology, BOKU University, Vienna, Austria.ORCID https://orcid.org/0000-0001-8409-454X
Peter HinterdorferInstitute of Biophysics, Johannes Kepler University Linz, Linz, Austria.ORCID https://orcid.org/0000-0003-2583-1305

Funding

Austrian Agency for Education and Internationalisation (OeAD) WTZ PL01/2024Austrian Science Fund 10.55776/COE7Austrian Science Fund 10.55776/P30314Austrian Science Fund 10.55776/P35103Austrian Science Fund 10.55776/P35166Austrian Science Fund 10.55776/V584Austrian Science Fund I3173European Research Council (ERC Advanced 789121European Union's Horizon research and innovation programme H2020-MSCA-ITN-2016German Research Foundation TA157/12-1LIT SeedplusMED Grant LIT-2024-13-SMED-111Marie Skolodowska-Curie grant agreement 721874National Institute of Virology and Bacteriology (Programme EXCELES LX22NPO5103Volkswagen Foundation 96496WWTF LS19-029
6 · The paper itself

Abstract

Conformational plasticity allows class I viral fusion proteins, including the SARS-CoV-2 spike, to undergo major structural rearrangements that support receptor binding and membrane fusion, making them key vaccine and antiviral targets. Using high-speed atomic force microscopy (AFM) and single-molecule force spectroscopy, we analyzed the ancestral and nine spike variants and found an evolutionary trend from increased flexibility in early strains to greater rigidification beginning with Delta, fluctuating plasticity in Omicron sublineages, and pronounced compaction in JN.1. Delta favored multivalent ACE2 engagement through its three receptor-binding domains, whereas later Omicron variants shifted toward predominantly single-site interactions. This change was compensated by stronger RBD-ACE2 bond stability. Overall, spike evolution appears to balance openness and compaction to regulate receptor accessibility, mobility, and immune escape while preserving or enhancing entry efficiency. These single-molecule measurements define functional constraints on viral adaptation and may inform prediction of future variants and design of improved countermeasures.

Indexed as

atomic force microscopybiophysicsevolutionforce spectroscopyglycosylationmass spectrometryprotein engineeringprotein purificationsevere acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2)virology

Identifiers

PMID42671377
PMCPMC13528683

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.