Evidence map›Paper›PMID 42667405›Full record

ArticleJournal of molecular modeling2026

Car-Parrinello molecular dynamics of QMAP-DMSO microsolvation: first-shell structure and solvent-induced polarization.

Renato Medeiros, Francisco A P Osório, Clodoaldo Valverde, Ademir J Camargo

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Article in Journal of molecular modeling, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

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4 authors.

Renato MedeirosLaboratory of Applied Molecular Modeling and Simulation (LaMMAS), State University of Goiás, Anápolis, Goiás, Brazil. renato.medeiros@ueg.br.ORCID https://orcid.org/0009-0003-8608-7839
Francisco A P OsórioInstitute of Physics, Federal University of Goiás, Goiânia, Goiás, Brazil.
Clodoaldo ValverdeLaboratory of Applied Molecular Modeling and Simulation (LaMMAS), State University of Goiás, Anápolis, Goiás, Brazil.
Ademir J CamargoTheoretical and Structural Chemistry of Anápolis, (QTEA) State University of Goiás, Anápolis, Goiás, Brazil.

Funding

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6 · The paper itself

Abstract

contextDirectional solute-solvent contacts can influence the electrostatic response of donor-acceptor chromophores, although such local effects are often represented only as averaged contributions in continuum solvent models. Quinolinylaminophenol (QMAP) in dimethyl sulfoxide (DMSO) was examined as an explicit first-shell microsolvation model to clarify how local solvent organization couples to QMAP conformation and dipolar response. The Car-Parrinello molecular dynamics trajectory indicates a geometric reorganization around 12-13 ps, accompanied by changes in the first-shell DMSO dipolar arrangement. Within the limitations of the finite microsolvated model, these results suggest that transient first-shell solvent organization contributes to the modulation of the local electrostatic environment of QMAP, rather than acting only as a static dielectric background.

methodsThe gas-phase QMAP geometry was optimized at the CAM-B3LYP/6-311 + + G(d,p) level using Gaussian 16. The explicit QMAP-DMSO model contained one QMAP molecule and 21 DMSO molecules in a periodic cubic cell and was propagated by Car-Parrinello molecular dynamics using the CPMD code. The production trajectory was obtained with the PBE exchange-correlation functional, Troullier-Martins norm-conserving pseudopotentials, a plane-wave basis set, NVT equilibration at 300 K, and a restarted thermostatted CPMD production protocol, with a total analyzed trajectory length of approximately 32 ps. Structural, hydrogen-bond, dipole-moment, IR-like, and orientational-correlation analyses were carried out using in-house Python scripts.

Indexed as

Car–Parrinello molecular dynamicsDipole autocorrelationFirst-shell microsolvationOrientational correlationQMAP-DMSOSolvent-induced polarization

Identifiers

PMID42667405
PMCPMC13526059

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