Evidence map›Paper›PMID 42666489›Full record

ArticleFrontiers in immunology2026

Integrative single-cell and bulk transcriptomic analyses identify a microglia-associated NAGLU signature linked to disulfidptosis-associated transcriptional patterns after spinal cord injury.

Xiaoqin Liu, Jiating Hu, Wenxia Zhu, Guodong Shi, Ping Kang

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Article in Frontiers in immunology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

5 authors.

Xiaoqin LiuYan'an Medical College of Yan'an University, Yan'an, China.
Jiating HuYan'an Medical College of Yan'an University, Yan'an, China.
Wenxia ZhuYan'an Medical College of Yan'an University, Yan'an, China.
Guodong ShiYan'an Medical College of Yan'an University, Yan'an, China.
Ping KangDepartment of Neurosurgery, The Affiliated Hospital of Yan'an University, Yan'an, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Spinal cord injury (SCI) induces profound neuroinflammatory responses and extensive cellular remodeling within the injured spinal cord. Disulfidptosis, a recently identified form of regulated cell death associated with disulfide stress, has been implicated in cellular stress responses and tissue injury. However, the transcriptional characteristics of disulfidptosis-related genes (DRGs) and their associations with the cellular microenvironment of SCI remain poorly understood. Methods: Single-cell RNA sequencing data from GSE162610 were analyzed to characterize cellular heterogeneity in DRG-associated transcriptional signatures. AUCell was used to calculate DRG signature scores at the single-cell level, and differentially expressed genes associated with DRG signatures were identified by comparing cells with high and low DRG signature scores. Bulk transcriptomic data from GSE47681 were analyzed using differential expression analysis and weighted gene co-expression network analysis (WGCNA) to identify SCI-associated differentially expressed genes and gene modules correlated with DRG signature scores. Candidate genes were identified by integrating single-cell marker genes, bulk differentially expressed genes, and genes from DRG signature-associated WGCNA modules. A random forest algorithm was applied to prioritize key candidate genes, followed by validation in the independent dataset GSE45006. The expression pattern of the selected candidate gene was further examined at single-cell resolution and validated at the protein level in a rat SCI model 3 days after injury. Results: DRG signature scores exhibited marked heterogeneity across spinal cord cell types. Integrative analyses identified 24 candidate genes associated with DRG-related transcriptional alterations. Functional enrichment analyses highlighted lysosome-related pathways, efferocytosis, macrophage activation, and glycosaminoglycan degradation. Random forest analysis prioritized three genes for external validation, among which Conclusions: This study characterizes DRG-associated transcriptional heterogeneity in SCI and identifies

Indexed as

DisulfidptosisMicrogliaSpinal Cord InjuriesTranscriptomeAnimalsGene Expression ProfilingGene Regulatory NetworksRatsSingle-Cell AnalysisSingle-Cell Gene Expression AnalysisdisulfidptosismicrogliaNAGLUsingle-cell RNA sequencingspinal cord injury

Identifiers

PMID42666489
PMCPMC13522192

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.