Evidence map›Paper›PMID 42666033›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2026

Gut Microbiota-Isoallolithocholic Acid Crosstalk Promotes Calcium Oxalate Kidney Stone Formation via PARP1-Mediated Parthanatos.

Zijian Zhou, Ruixi Yu, Xuan Zhou, Feng Shi, Zeyu Lin, Peng Gao, Lujia Wang, Ninghan Feng, Zhong Wu, Dawei Wang

Abstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Zijian ZhouDepartment of Urology, Huashan Hospital, Fudan University, Shanghai, P. R. China.ORCID https://orcid.org/0009-0009-5202-1536
Ruixi YuDepartment of Urology, Jiangnan University Medical Center, Wuxi, P. R. China.
Xuan ZhouPrecision Research Center for Refractory Diseases, Department of Urology, Shanghai General Hospital, Jiaotong University, School of Medicine, Shanghai, P. R. China.ORCID https://orcid.org/0000-0002-4873-8886
Feng ShiCivil Aviation Shanghai Hospital, Gubei Branch of Ruijin Hospital, Shanghai, P. R. China.
Zeyu LinDepartment of Critical Care Medicine, Nanjing First Hospital, Nanjing University of Chinese Medicine, Nanjing, P. R. China.ORCID https://orcid.org/0009-0001-5862-9536
Peng GaoDepartment of Urology, Huashan Hospital, Fudan University, Shanghai, P. R. China.
Lujia WangDepartment of Urology, Huashan Hospital, Fudan University, Shanghai, P. R. China.
Ninghan FengDepartment of Urology, Jiangnan University Medical Center, Wuxi, P. R. China.ORCID https://orcid.org/0000-0002-0892-6102
Zhong WuDepartment of Urology, Huashan Hospital, Fudan University, Shanghai, P. R. China.ORCID https://orcid.org/0000-0002-5103-9517
Dawei WangDepartment of Urology, Ruijin Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, P. R. China.ORCID https://orcid.org/0000-0003-3063-0874

Funding

National Natural Science Foundation of China 82500928
6 · The paper itself

Abstract

Bile acids have been implicated in calcium oxalate (CaOx) nephrolithiasis. Here, we employ multi-omics approaches to identify isoallolithocholic acid (isoalloLCA) as the key bile acid elevated in the feces, serum, kidney, and urine of CaOx rats, confirmed by spatial metabolomics. 16S sequencing and metagenomic analyses indicate that elevated isoalloLCA levels in CaOx rats or individuals are likely of microbial origin. Mechanistically, isoalloLCA binds to PARP1 via specific molecular interactions validated by surface plasmon resonance and cellular thermal shift assays. Knockdown of PARP1 by adeno-associated virus microinjection or pharmacological inhibition with PARP1 inhibitor AZD5305 significantly attenuates isoalloLCA-mediated crystal deposition, renal tubular injury, and mitochondrial functional impairment in both the CaOx rat and mouse models. Furthermore, the antibiotic-mediated depletion of the gut microbiota in mice markedly reduced isoalloLCA levels, whereas fecal microbiota transplantationut contributes to isoalloLCA-mediated CaOx stone formation, demonstrating a causal link between gut microbiota and isoalloLCA. In vitro, isoalloLCA promoted oxalate-induced renal tubular epithelial cell injury and parthanatos via targeting PARP1, including DNA damage, excessive PARP1 activation, PAR accumulation, mitochondrial damage, nuclear translocation of AIF and MIF. These findings establish the microbiota-isoalloLCA-PARP1-parthanatos axis in CaOx nephrolithiasis and identify PARP1 as a promising therapeutic target for kidney stone management.

Indexed as

bile acidcalcium oxalate nephrolithiasisgut microbiotaPARP1parthanatos

Identifiers

PMID42666033
PMCPMC13525351

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.