Evidence map›Paper›PMID 42656952›Full record

ArticleComputational statistics & data analysis2024

A double Pólya-Gamma data augmentation scheme for a hierarchical Negative Binomial - Binomial data model.

Xuan Ma, Jenný Brynjarsdóttir, Thomas LaFramboise

Abstract read
In one paragraph

Article in Computational statistics & data analysis, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Xuan MaCase Western Reserve University, 10900 Euclid Ave, Cleveland, 44106, OH, United States.
Jenný BrynjarsdóttirCase Western Reserve University, 10900 Euclid Ave, Cleveland, 44106, OH, United States.
Thomas LaFramboiseCase Western Reserve University, 10900 Euclid Ave, Cleveland, 44106, OH, United States.

Funding

Tools and Data for Bayesian Modeling of Mitochondrial Genome Dynamics in Human DiseaseR01LM013067 · NLM · CASE WESTERN RESERVE UNIVERSITY · PI BRYNJARSDOTTIR, JENNY, LAFRAMBOISE, THOMAS LOUIS · 2020 to 2024
$1.5M
NLM NIH HHS R01 LM013067
6 · The paper itself

Abstract

A double Pólya-Gamma data augmentation scheme is developed for posterior sampling from a Bayesian hierarchical model of total and categorical count data. The scheme applies to a Negative Binomial - Binomial (NBB) hierarchical regression model with logit links and normal priors on regression coefficients. The approach is shown to be very efficient and in most cases out-performs the Stan program. The hierarchical modeling framework and the Pólya-Gamma data augmentation scheme are applied to human mitochondrial DNA data.

Indexed as

Bayesian hierarchical modelData augmentationMitochondrial DNA dataPólya-Gamma

Identifiers

PMID42656952
PMCPMC13508328

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.