Evidence map›Paper›PMID 42653352›Full record

ArticleInternational journal of molecular sciences2026

Proposal of an Algorithm for the Clinical and Molecular Diagnosis of RASopathies Based on HPO Nomenclature.

Fernanda Meneses, Carlos Quintero, Juliana Lores, Eidith Gómez-Pineda, Diana Ramírez-Montaño, Estephania Candelo, Harry Pachajoa

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Article in International journal of molecular sciences, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Fernanda MenesesFacultad de Ciencias de la Salud, Universidad Icesi, Cali 760032, Colombia.
Carlos QuinteroFacultad de Ciencias de la Salud, Universidad Icesi, Cali 760032, Colombia.
Juliana LoresDepartamento de Ciencias Básicas, Facultad de Ciencias de la Salud, Pontificia Universidad Javeriana, Cali 760032, Colombia.
Eidith Gómez-PinedaFacultad de Ciencias de la Salud, Universidad Icesi, Cali 760032, Colombia.ORCID 0009-0008-3664-6387
Diana Ramírez-MontañoUnidad de Medicina Genómica y Genética, Clínica Imbanaco Grupo Quironsalud, Cali 760032, Colombia.ORCID 0000-0001-9424-7554
Estephania CandeloDepartment of Otolaryngology and Head-Neck Surgery, University of Washington, Seattle, WA 98195, USA.ORCID 0000-0003-3002-7071
Harry PachajoaServicio de Genética Médica, Fundación Valle del Lili, Cali 760032, Colombia.ORCID 0000-0003-2672-0439

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RASopathies are a group of genetic disorders caused by germline variants affecting the RAS/MAPK pathway. Their shared phenotypic features-craniofacial anomalies, cardiac defects, cutaneous findings, neurodevelopmental issues, and cancer predisposition-make diagnosis challenging, especially since most lack standardized clinical criteria. This study aimed to develop a practical diagnostic algorithm based on high-frequency Human Phenotype Ontology (HPO) features. Key clinical variables for each RASopathy were identified through HPO, PubMed, and GeneReviews. Only findings present in 80-99% of cases or supported by expert consensus were included. A decision-tree algorithm was constructed and preliminarily evaluated using a blinded cohort of 50 individuals with confirmed molecular diagnoses. Patients were eligible for inclusion if they met the following criteria: (1) molecularly confirmed diagnosis of a RASopathy by next-generation sequencing identifying a pathogenic or likely pathogenic variant; (2) availability of complete phenotypic records in the institutional clinical database; and (3) age at evaluation between 0 and 18 years. Patients were excluded if phenotypic data were incomplete or if molecular confirmation was absent. The algorithm integrates phenotypic patterns and genotype-phenotype correlations. Validation showed 78% accuracy (95% CI: 64.0-88.4%) for clinical diagnosis and 66% accuracy (95% CI: 51.2-78.8%) for molecular prediction. To our knowledge, this is the first HPO-based diagnostic algorithm for the clinical and molecular approach to RASopathies. It provides a structured, accessible tool to improve early recognition and guide molecular testing, particularly for the RASopathy subtypes represented in the validation cohort. Further external validation including underrepresented subtypes is required.

Indexed as

Algorithmsras ProteinsAdolescentChildFemaleGenetic Association StudiesHumansMalePhenotypeTerminology as Topicras Proteinsdiagnostic algorithmHuman Phenotype Ontologyrare genetic disorderRASopathies

Identifiers

PMID42653352
PMCPMC13513118

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