Evidence map›Paper›PMID 42650048›Full record

ArticleGenes2026

Genomic Insights into the Giant Shank Phenotype of Dong Tao Chickens Reveal Candidate Loci Involved in Skeletal Growth and Development.

Thuy Thi-Dieu Nguyen, Mauro Penasa, Thuy Thi-Ngoc Dinh, Filippo Cendron

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Article in Genes, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Thuy Thi-Dieu NguyenInstitute of Biology, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet, Nghia Do, Hanoi 11307, Vietnam.ORCID 0000-0001-9128-4712
Mauro PenasaDepartment of Agronomy, Food, Natural Resources, Animals and Environment, University of Padova, 35020 Legnaro, Italy.ORCID 0000-0001-9984-8738
Thuy Thi-Ngoc DinhInstitute of Biology, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet, Nghia Do, Hanoi 11307, Vietnam.
Filippo CendronDepartment of Agronomy, Food, Natural Resources, Animals and Environment, University of Padova, 35020 Legnaro, Italy.ORCID 0000-0002-8221-7566

Funding

Vietnam Academy of Science and Technology KHCBSS.02/21-23
6 · The paper itself

Abstract

backgroundThe Dong Tao (DT) chicken is a traditional Vietnamese breed characterized by extremely enlarged shanks, representing one of the most distinctive morphological traits observed in domestic chickens. Despite its economic and cultural importance, the genetic basis underlying this phenotype remains poorly understood. Therefore, this study aimed to identify genomic regions and candidate genes associated with the giant shank phenotype in DT chickens.

methodsA total of 87 chickens were analyzed, including 30 DT individuals displaying the giant shank phenotype and 57 control animals from the Ac, Choi, and Ho Vietnamese breeds. Genotype data were obtained from high-density 600K single-nucleotide polymorphism arrays and low-coverage whole-genome sequencing datasets. Genome-wide association study (GWAS) was performed using a linear mixed model, while genetic differentiation between DT and control populations was evaluated through F

resultsFour significant genomic regions were identified on chromosomes 2, 4, 5, and 7. These regions harbored several biologically relevant candidate genes, including

conclusionsThese findings provide novel insights into the genetic architecture underlying the giant shank phenotype in domestic chickens and establish a foundation for future studies aimed at identifying the causal variants and molecular mechanisms involved in giant shank development.

Indexed as

Bone DevelopmentChickensQuantitative Trait LociAnimalsGenome-Wide Association StudyLinkage DisequilibriumPhenotypePolymorphism, Single Nucleotidecandidate geneDong Tao chickengenome-wide association study (GWAS)giant shank phenotypeSNPs

Identifiers

PMID42650048
PMCPMC13512154

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.