Evidence map›Paper›PMID 42645991›Full record

ArticleJournal of imaging2026

Turning Immersive Viewers into Analytical Workspaces: ASCRIBE-XR and Agent-Driven Scientific Visualization.

Ronald Pandolfi, Luke Weidner, James Sethian, Jeffrey Donatelli, Daniela Ushizima

Abstract read
In one paragraph

Article in Journal of imaging, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ronald PandolfiApplied Math and Computational Research Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.ORCID 0000-0003-0824-8548
Luke WeidnerComputer Science Department, Sonoma State University, Rohnert Park, CA 94928, USA.
James SethianApplied Math and Computational Research Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.ORCID 0000-0002-7250-7789
Jeffrey DonatelliApplied Math and Computational Research Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.ORCID 0009-0003-7173-0174
Daniela UshizimaApplied Math and Computational Research Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.ORCID 0000-0002-7363-9468

Funding

US Department of Energy (DOE) Office of Science, Advanced Scientific Computing Research (ASCR) DE-AC02-05CH11231
6 · The paper itself

Abstract

Scientific visualization is changing from passive observation to active, AI-assisted collaboration. While Extended Reality (XR) has proven valuable for comprehending dense 3D arrays, traditional VR applications are typically deployed in rigid, single-purpose, and monolithic architectures. In this paper, we present the evolution of ASCRIBE-XR: a virtual reality platform backed by remote computation that has been re-engineered into a dynamic, service-oriented ecosystem. We introduce three core innovations that make immersive data analysis easier, faster, and more flexible when using multimodal scientific imaging. First, a lightweight Python REST interface decouples XR logic from the rendering engine, enabling real-time, programmable scene customization and on-demand data generation. Second, we present a Specimen Catalog architecture that lets the platform pivot between radically different disciplines, ranging from archaeological heterogeneous concrete and fuel-cell membranes to the root system of a bioenergy grass, by describing each dataset through portable metadata rather than hard-coded application logic. Finally, we introduce a prompt-driven layer powered by the Claude Agent SDK, allowing researchers to generate, segment, and manipulate volumetric and mesh data through natural language dialogue within the virtual space. For example, applying foundation models such as the Segment Anything Model (SAM) to perform zero-shot segmentation on demand. By bridging human intent with remote computation, ASCRIBE-XR relaxes the constraints of conventional visualization tools, offering a highly adaptable, conversational platform for scientific discovery with human auditing.

Indexed as

agentic analysisAI auditingcomputer visionLLMvirtual reality

Identifiers

PMID42645991
PMCPMC13514590

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.