Evidence map›Paper›PMID 42645154›Full record

Observational studyCritical care explorations2026

Proteomic Immune Signatures of Severe HIV-Associated Tuberculosis in Sub-Saharan Africa: A Prospective, Multicenter Analysis From Uganda.

Jesse E Ross, Alin S Tomoiaga, Nicholas Owor, Xuan Lu, Joseph Shinyale, Tonny Kiyingi, Ignatius Asasira, Peter James Eliku, John Bosco Nsubuga, Christopher Nsereko and 23 more

Abstract readMulticenter StudyObservational Study
In one paragraph

Observational study in Critical care explorations, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

33 authors.

Jesse E RossDepartment of Medicine, Division of Pulmonary, Critical Care, Allergy, and Immunology, David Geffen School of Medicine at University of California, Los Angeles, CA.ORCID 0009-0008-3405-0897
Alin S TomoiagaDepartment of Accounting, Business Analytics, Computer Information Systems, and Law, Manhattan College, Bronx, NY.
Nicholas OworDepartment of Arbovirology, Emerging and Re-emerging Infectious Diseases, Uganda Virus Research Institute, Entebbe, Uganda.
Xuan LuDepartment of Medicine, Division of Pulmonary, Allergy, and Critical Care Medicine, Vagelos College of Physicians and Surgeons, Columbia University, New York, NY.
Joseph ShinyaleEntebbe Regional Referral Hospital, Ministry of Health, Entebbe, Uganda.
Tonny KiyingiDepartment of Arbovirology, Emerging and Re-emerging Infectious Diseases, Uganda Virus Research Institute, Entebbe, Uganda.
Ignatius AsasiraDepartment of Arbovirology, Emerging and Re-emerging Infectious Diseases, Uganda Virus Research Institute, Entebbe, Uganda.
Peter James ElikuDepartment of Arbovirology, Emerging and Re-emerging Infectious Diseases, Uganda Virus Research Institute, Entebbe, Uganda.
John Bosco NsubugaEntebbe Regional Referral Hospital, Ministry of Health, Entebbe, Uganda.
Christopher NserekoEntebbe Regional Referral Hospital, Ministry of Health, Entebbe, Uganda.
Irene NayigaEntebbe Regional Referral Hospital, Ministry of Health, Entebbe, Uganda.
Stephen KyebambeEntebbe Regional Referral Hospital, Ministry of Health, Entebbe, Uganda.
Thomas OcharTororo General Hospital, Ministry of Health, Tororo, Uganda.
Moses KiwubeyiTororo General Hospital, Ministry of Health, Tororo, Uganda.
Rittah NankwangaTororo General Hospital, Ministry of Health, Tororo, Uganda.
Kai NieHuman Immune Monitoring Center, Icahn School of Medicine at Mount Sinai, New York, NY.
Hui XieHuman Immune Monitoring Center, Icahn School of Medicine at Mount Sinai, New York, NY.
Sam Miake-LyeHuman Immune Monitoring Center, Icahn School of Medicine at Mount Sinai, New York, NY.
Bryan VillagomezHuman Immune Monitoring Center, Icahn School of Medicine at Mount Sinai, New York, NY.
Jingjing QiHuman Immune Monitoring Center, Icahn School of Medicine at Mount Sinai, New York, NY.
Steven J ReynoldsNational Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD.
Martina Cathy NakibuukaRakai Health Sciences Program, Kalisizo, Uganda.
John KayiwaDepartment of Arbovirology, Emerging and Re-emerging Infectious Diseases, Uganda Virus Research Institute, Entebbe, Uganda.
Mercy HaumbaDepartment of Arbovirology, Emerging and Re-emerging Infectious Diseases, Uganda Virus Research Institute, Entebbe, Uganda.
Joweria NakaseeguDepartment of Arbovirology, Emerging and Re-emerging Infectious Diseases, Uganda Virus Research Institute, Entebbe, Uganda.
Xiaoyu CheCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY.
Risa HoffmanDepartment of Medicine, Division of Infectious Diseases, David Geffen School of Medicine at University of California, Los Angeles, CA.
John A BelperioDepartment of Medicine, Division of Pulmonary, Critical Care, Allergy, and Immunology, David Geffen School of Medicine at University of California, Los Angeles, CA.
Julius J LutwamaDepartment of Arbovirology, Emerging and Re-emerging Infectious Diseases, Uganda Virus Research Institute, Entebbe, Uganda.
Seunghee Kim-SchulzeHuman Immune Monitoring Center, Icahn School of Medicine at Mount Sinai, New York, NY.
Max R O'DonnellDepartment of Medicine, Division of Pulmonary, Allergy, and Critical Care Medicine, Vagelos College of Physicians and Surgeons, Columbia University, New York, NY.
Barnabas BakamutumahoDepartment of Arbovirology, Emerging and Re-emerging Infectious Diseases, Uganda Virus Research Institute, Entebbe, Uganda.
Matthew J CummingsDepartment of Medicine, Division of Pulmonary, Allergy, and Critical Care Medicine, Vagelos College of Physicians and Surgeons, Columbia University, New York, NY.

Funding

Clinical and Translational Science AwardUL1TR001873 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI REILLY, MUREDACH P · 2016 to 2025
$99.0M
The Columbia University Training Program in Lung ScienceT32HL105323 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Jahar Bhattacharya, Wellington V. Cardoso · 2011 to 2026
$4.7M
Multidimensional and longitudinal immune profiling of sepsis in UgandaR01AI184997 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Matthew John Cummings · 2024 to 2026
$2.0M
NCATS NIH HHS UL1 TR001873NHLBI NIH HHS T32 HL105323NIAID NIH HHS R01 AI184997
6 · The paper itself

Abstract

objectivesSevere tuberculosis (TB) is a major cause of critical illness and death in people living with HIV (PLWH) worldwide. Despite this, the immunopathology of severe HIV-associated TB (HIV/TB) is poorly understood. We aimed to identify an immunopathologic signature of severe HIV/TB in sub-Saharan Africa. DESIGN AND

settingWe analyzed proteomic data from two prospective observational cohorts of adults hospitalized with severe undifferentiated infection in Uganda: an urban discovery cohort (Entebbe, n = 241) and a rural validation cohort (Tororo, n = 253). PATIENTS: Adults (age ≥ 18 yr) hospitalized with severe febrile illness.

interventionsNone. MEASUREMENTS AND MAIN

resultsAcross both cohorts, severe HIV/TB was common, affecting 18% of participants in the discovery cohort and 21% in the validation cohort. Overall mortality was significant (30-d mortality of 22% in the discovery cohort and 60-d mortality of 26% in the validation cohort). Participants were stratified into three HIV/TB phenotypes: HIV-negative without TB, PLWH without TB, and PLWH with microbiologically diagnosed TB. We applied ordinal random forest models in the discovery cohort as a supervised feature-selection approach to identify proteins associated with progressive HIV/TB phenotype. In both cohorts, PLWH with microbiologically diagnosed TB were at highest risk of critical illness and death (30-d mortality of 42% in the discovery cohort and 60-d mortality of 52% in the validation cohort). An eight-protein signature reliably distinguished this phenotype, reflecting mediators of macrophage/dendritic cell activation (lysosome-associated membrane glycoprotein 3), natural killer cell and T-cell stimulation and cytotoxicity (cluster of differentiation 70, class I-restricted T-cell-associated molecule), B-cell activation (immunoglobulin lambda constant 2), protease-mediated tissue injury (protease, serine 2 [trypsin-2]), dysregulated coagulation (serpin peptidase inhibitor, clade A [alpha-1 antitrypsin], member 5), extracellular matrix remodeling (epidermal growth factor-containing fibulin-like extracellular matrix protein 1), and growth hormone/insulin-like growth factor axis dysregulation (insulin-like growth factor binding protein 3).

conclusionsWe identified an immunologic signature of severe HIV/TB defined by mediators of macrophage/dendritic cell and cytotoxic lymphocyte activation, extracellular matrix remodeling, and dysregulated coagulation. These findings offer new insight into HIV/TB pathobiology and highlight potential targets for host-directed therapies in this high-risk population.

Indexed as

HIV InfectionsProteomicsTuberculosisAdultFemaleHumansMaleMiddle AgedProspective StudiesUgandaAfricahuman immunodeficiency virusproteomicssepsistuberculosis

Identifiers

PMID42645154
PMCPMC13521507

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.