Evidence map›Paper›PMID 42642814›Full record

ArticleChemMedChem2026

Not Quite Folded: Challenges in Predicting the hNPS-hNPSR-Ile107 Complex With AlphaFold2 Multimer.

Valentina Albanese, Michela Argentieri, Federica Agosta, Alessandra Rizzo, Delia Preti, Rainer K Reinscheid, Girolamo Calò, Remo Guerrini, Alfonso Carotenuto, Salvatore Pacifico and 2 more

Abstract read
In one paragraph

Article in ChemMedChem, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Valentina AlbaneseDepartment of Chemical, Pharmaceutical and Agricultural Sciences (DOCPAS), University of Ferrara, Ferrara, Italy.ORCID https://orcid.org/0000-0002-1947-2644
Michela ArgentieriDepartment of Neuroscience and Rehabilitation, Laboratory for Technologies of Advanced Therapies (LTTA), University of Ferrara, Ferrara, Italy.
Federica AgostaDepartment of Chemical, Pharmaceutical and Agricultural Sciences (DOCPAS), University of Ferrara, Ferrara, Italy.
Alessandra RizzoDepartment of Chemical, Pharmaceutical and Agricultural Sciences (DOCPAS), University of Ferrara, Ferrara, Italy.
Delia PretiDepartment of Chemical, Pharmaceutical and Agricultural Sciences (DOCPAS), University of Ferrara, Ferrara, Italy.ORCID https://orcid.org/0000-0002-1075-3781
Rainer K ReinscheidInstitute of Pharmacology and Toxicology, Jena University Hospital, Jena, Germany.
Girolamo CalòSection of Pharmacology, Department of Pharmaceutical and Pharmacological Sciences, University of Padova, Padova, Italy.
Remo GuerriniDepartment of Chemical, Pharmaceutical and Agricultural Sciences (DOCPAS), University of Ferrara, Ferrara, Italy.
Alfonso CarotenutoDepartment of Pharmacy, University of Naples Federico II, Napoli, Italy.ORCID https://orcid.org/0000-0001-7532-5449
Salvatore PacificoDepartment of Chemical, Pharmaceutical and Agricultural Sciences (DOCPAS), University of Ferrara, Ferrara, Italy.ORCID https://orcid.org/0000-0002-3377-5107
Chiara RuzzaDepartment of Neuroscience and Rehabilitation, Laboratory for Technologies of Advanced Therapies (LTTA), University of Ferrara, Ferrara, Italy.ORCID https://orcid.org/0000-0003-1360-202X
Antonella CiancettaDepartment of Chemical, Pharmaceutical and Agricultural Sciences (DOCPAS), University of Ferrara, Ferrara, Italy.ORCID https://orcid.org/0000-0002-7612-2050

Funding

Ministero dell'Università e della Ricerca PNRR D.M. 352/2022 - M4C2 I.3.3Ministero dell'Università e della Ricerca PRIN2022FPWYA8Università degli Studi di Ferrara FAR 2024
6 · The paper itself

Abstract

The human neuropeptide S (NPS) receptor (NPSR) is a Class A peptide G protein-coupled receptor expressed in the central nervous system and endogenously activated by NPS, a 20-mer peptide. NPSR activation promotes cellular excitability via Gq and Gs signalling. Studies suggest that receptor antagonists may reduce drug-seeking behaviours, whilst agonists represent innovative non-sedating anxiolytics with memory-enhancing effects. Despite its therapeutic potential, NPSR remains poorly characterised, with neither experimental receptor structures nor drug-like clinical candidates available. To fill this gap, we applied a previously validated AlphaFold2 Multimer-based protocol to model the hNPS-hNPSR complex. The model showing higher stability in molecular dynamics simulations and consistency with known structure-activity relationships served as template to design novel hNPS analogues. However, experimental validation through synthesis and in vitro pharmacological evaluation of 20 novel truncated cyclic peptides revealed the model's inability to capture hNPS bioactive conformation, as most analogues were inactive as agonists. By exploiting the stereochemical switch in hNPS hinge region, we identified four novel cyclic antagonists (17-20, pA

Indexed as

NeuropeptidesPeptides, CyclicReceptors, G-Protein-CoupledHumansMolecular Dynamics SimulationStructure-Activity RelationshipNeuropeptidesneuropeptide S, humanPeptides, CyclicReceptors, G-Protein-CoupledAlphaFold2cyclic peptidesG protein‐coupled receptormolecular dynamicsneuropeptide S receptor

Identifiers

PMID42642814
PMCPMC13507374

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.