Evidence map›Paper›PMID 42638159›Full record

ArticleEnvironmental microbiology2026

Proteomic Evidence for Biofilm-Mediated Copper Stress Adaptation in Oleidesulfovibrio alaskensis G20.

Payal Thakur, Abhilash Kumar Tripathi, Priya Saxena, Boo Shan Tseng, Rajesh Kumar Sani

Abstract read
In one paragraph

Article in Environmental microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Payal ThakurDepartment of Chemical and Biological Engineering, South Dakota School of Mines and Technology, Rapid City, South Dakota, USA.ORCID https://orcid.org/0000-0001-8611-345X
Abhilash Kumar TripathiDepartment of Analytical Development, Fujifilm, College Station, Texas, USA.
Priya SaxenaDepartment of Chemical and Biological Engineering, South Dakota School of Mines and Technology, Rapid City, South Dakota, USA.
Boo Shan TsengSchool of Life Sciences, University of Las Vegas, Las Vegas, Nevada, USA.ORCID https://orcid.org/0000-0001-7563-0232
Rajesh Kumar SaniDepartment of Chemical and Biological Engineering, South Dakota School of Mines and Technology, Rapid City, South Dakota, USA.ORCID https://orcid.org/0000-0002-5493-252X

Funding

National Science Foundation 1849206National Science Foundation 1920954
6 · The paper itself

Abstract

Copper (Cu) is an essential cofactor for enzymes regulating key metabolic processes; however, excess Cu can inhibit bacterial growth. The ability of Oleidesulfovibrio alaskensis G20 (OA G20) to survive under heavy metal stress is compelling. Our previous study on OA G20 exposed to Cu suggests that bacteria might use biofilm formation to adapt to high levels of toxic metal ions. To elucidate the molecular mechanisms underlying this adaptation, we performed a comparative proteomic analysis of OA G20 stress-induced biofilms (30 μM Cu) versus control (no Cu) and their respective extracellular fractions. Proteomic analysis revealed that among the differentially regulated intracellular proteins identified in this study, 47.93% were upregulated and 52.07% were downregulated in OA G20 biofilms exposed to 30 μM Cu compared to control. Similarly, 41.05% of extracellular proteins were upregulated and 58.95% were downregulated. The significantly modulated proteins (log2FC > 1) were involved in heavy-metal ion transportation, cell division, chemotaxis, cell motility and cell morphology. Our results also identified 133 hypothetical proteins under copper stress, several of which were related to prokaryotic membrane lipoprotein, cell and flagellar motility, and Type VI secretion system, offering new avenues for future research in bioremediation and biofilm mitigation strategies in industrial settings.

Indexed as

Adaptation, PhysiologicalBacterial ProteinsBiofilmsCopperProteomeStress, PhysiologicalGene Expression Regulation, BacterialProteomicsBacterial ProteinsCopperProteome

Identifiers

PMID42638159
PMCPMC13503979

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.