Evidence map›Paper›PMID 42637888›Full record

ArticleNature microbiology2026

Colibactin produced by a honeybee gut symbiont mediates pathogen defence.

Yulin Song, J Elijah Powell, Joel W H Wong, Yunxi Liu, Miguel A Aguilar Ramos, Tyler De Jong, Patrick J Lariviere, Jayaditya Maganti, Emily P Balskus, Nancy A Moran

Abstract read
PubMed Publisher
In one paragraph

Article in Nature microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Colibactin beyond carcinogenesis.Nature microbiology · 2026
    Article
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Yulin SongDepartment of Integrative Biology, University of Texas, Austin, TX, USA. yulinsong450@gmail.com.ORCID http://orcid.org/0000-0002-9318-8158
J Elijah PowellDepartment of Integrative Biology, University of Texas, Austin, TX, USA.
Joel W H WongDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA.ORCID http://orcid.org/0000-0003-4627-4878
Yunxi LiuDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA.
Miguel A Aguilar RamosDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-2537-8371
Tyler De JongDepartment of Integrative Biology, University of Texas, Austin, TX, USA.
Patrick J LariviereDepartment of Integrative Biology, University of Texas, Austin, TX, USA.ORCID http://orcid.org/0000-0002-8427-3879
Jayaditya MagantiDepartment of Integrative Biology, University of Texas, Austin, TX, USA.
Emily P BalskusDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-5985-5714
Nancy A MoranDepartment of Integrative Biology, University of Texas, Austin, TX, USA. nancy.moran@austin.utexas.edu.ORCID http://orcid.org/0000-0003-2983-9769

Funding

Elucidating the molecular bases of species interactions in host-associated bacterial communitiesR35GM131738 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI MORAN, NANCY A. · 2019 to 2023
$2.0M
The molecular bases of interbacterial and bacterial-host interactions in microbial communitiesR35GM158145 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI Nancy A. Moran · 2025 to 2026
$793k
United States Department of Defense | United States Army | U.S. Army Research, Development and Engineering Command | Army Research Office (ARO) W911NF-20-1-0195U.S. Department of Health & Human Services | National Institutes of Health (NIH) R35GM131738U.S. Department of Health & Human Services | National Institutes of Health (NIH) R35GM158145
6 · The paper itself

Abstract

Colibactin is a bacterial genotoxin that damages DNA and is linked to colorectal cancer. It is implicated in interbacterial competition but its role in natural microbiomes is unclear. Here we show that Frischella perrara, a colibactin-producing symbiont restricted to honeybee guts, lowers bee lifespan but increases survivorship following challenge with the opportunistic bee pathogen Serratia marcescens. F. perrara mutants lacking colibactin production fail to improve survivorship following challenge. The symbiont reduces pathogen loads by causing colibactin-dependent DNA damage and prophage induction. Colibactin is toxic to the pathogen under anoxic conditions, reflecting the bee gut. clbS, a gene conferring protection from colibactin, is ubiquitous among bacteria restricted to bee guts but absent from opportunistic colonizers, including pathogens. Indeed, F. perrara colonization representing colibactin pressure had limited impact on the bee gut microbiome where strains encode clbS. Our findings suggest that colibactin functions in interbacterial competition and protects against pathogens while permitting co-evolved symbionts to persist.

Indexed as

PeptidesPolyketidesSerratia marcescensSymbiosisAnimalsBeesDNA DamageGastrointestinal MicrobiomeGastrointestinal TractProphagescolibactinPeptidesPolyketides

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.