Evidence map›Paper›PMID 42635661›Full record

ArticleMarine biotechnology (New York, N.Y.)2026

Cooperative Chemical Biosynthesis of Tetrodotoxin: Evidence from Marine Microbial Contributors.

Pham Thi Hai Ha, Kim Do-Hyung, Nguyen Thanh Luan

Abstract read
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In one paragraph

Article in Marine biotechnology (New York, N.Y.), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Pham Thi Hai HaFaculty of Engineering and Technology, Van Hien University, Ho Chi Minh City, Vietnam.
Kim Do-HyungDepartment of Aquatic Life Medicine, College of Fisheries Sciences, Pukyong National University, Busan, South Korea.
Nguyen Thanh LuanHUTECH Institute of Applied Science, HUTECH University, Ho Chi Minh City, Vietnam. nt.luan@hutech.edu.vn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tetrodotoxin (TTX) is a potent neurotoxin widely distributed in pufferfish and other marine organisms, yet its microbial biosynthetic basis remains unresolved because no definitive bacterial TTX gene cluster has been identified. This study develops a hypothesis-generating comparative-genomic framework to prioritize bacterial genomes for experimental investigation of TTX-related metabolism; it does not demonstrate bacterial TTX biosynthesis. Thirteen genomes representing Pseudoalteromonas, Cytobacillus, Shewanella, and Vibrio were analyzed using whole-genome comparison, average amino acid identity (AAI), and a weighted functional-prioritization score. Candidate homologous gene families were assigned to four mechanistic groups: scaffold formation and nitrogen incorporation (Group A), redox tailoring and polyoxygenation (Group B), structural tailoring and rearrangement (Group C), and transport, regulation, and ecological support (Group D). The AAI structure revealed both closely related Vibrio lineages and deeply divergent genera, enabling interpretation of functional enrichment against contrasting genomic backgrounds. Cytobacillus gottheilii 1839 and Pseudoalteromonas tetraodonis DSM 16,099 had the highest cumulative scores, whereas Vibrio representatives showed moderate or partial enrichment profiles. These rankings reflect the distribution of hypothesized functional markers, rather than validated TTX-production capacity. Groups A and B were more discriminating than the broadly distributed Groups C and D. Accordingly, C. gottheilii 1839 and P. tetraodonis DSM 16,099 are proposed as high-priority targets for integrated metabolomics, transcriptomics, targeted gene disruption, and pathway-mining studies. The results support a dispersed, multi-module working hypothesis for microbial contribution to TTX-associated ecology, while emphasizing that the pathway, its products, and the causal role of individual strains remain to be experimentally resolved.

Indexed as

BacteriaGenome, BacterialTetrodotoxinAnimalsAquatic OrganismsMultigene FamilyPhylogenyPseudoalteromonasVibrioTetrodotoxinAverage amino acid identityCytobacillus gottheiliiPan-genomePseudoalteromonas tetraodonisPufferfishTetrodotoxinVibrio

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.