Evidence map›Paper›PMID 42632022›Full record

ArticleSTAR protocols2026

Protocol to study recurrence of Clostridioides difficile infection in murine model with built-in colonization and contamination controls.

Marjorie Pizarro-Guajardo, Trey Hejtmancik, Daniel Paredes-Sabja

Abstract read
In one paragraph

Article in STAR protocols, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Marjorie Pizarro-GuajardoDepartment of Arts & Sciences, Texas A&M University, College Station, TX 77843, USA. Electronic address: mpizarro-guajardo@tamu.edu.
Trey HejtmancikDepartment of Arts & Sciences, Texas A&M University, College Station, TX 77843, USA. Electronic address: trey3672@tamu.edu.
Daniel Paredes-SabjaDepartment of Arts & Sciences, Texas A&M University, College Station, TX 77843, USA. Electronic address: dparedes-sabja@tamu.edu.

Funding

Mechanisms of persistence of Clostridioides difficile in the intestinal mucosaR01AI177842 · NIAID · TEXAS A&M UNIVERSITY · PI Daniel Gonzalo Paredes-Sabja · 2024 to 2026
$1.9M
NIAID NIH HHS R01 AI177842
6 · The paper itself

Abstract

Pre-colonization with endogenous murine Clostridioides difficile strains and cross-contamination between animals can compromise recurrent C. difficile infection (R-CDI) studies. We present a murine R-CDI protocol with built-in colonization and contamination controls. Mice receive an antibiotic cocktail and clindamycin before challenge with C. difficile spores, followed by vancomycin to induce recurrence. Selective cycloserine-cefoxitin-fructose agar (CCFA)/taurocholate-CCFA (TCCFA) fecal cultures quantify colonization, while PCR ribotyping identifies endogenous contaminants as a quality control. A two-handler workflow minimizes cross-contamination.

Indexed as

ImmunologyMicrobiologyModel Organisms

Identifiers

PMID42632022
PMCPMC13524870

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.