Evidence map›Paper›PMID 42630734›Full record

ArticleFrontiers in oncology2026

Targeting the HPV E6-p53 degradation axis via computational and

Shamanth D Harishkumar, Shuaib Pasha, Rosemary Edwin, Sahana Madashetty, Bhargav Shreevatsa, Shiva Prasad Kollur, Chandan Shivamallu, Chandan Dharmashekar

Abstract read
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Article in Frontiers in oncology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Shamanth D HarishkumarDepartment of Biotechnology and Bioinformatics, School of Life Sciences, JSS Academy of Higher Education and Research, Mysuru, Karnataka, India.
Shuaib PashaDepartment of Biotechnology and Bioinformatics, School of Life Sciences, JSS Academy of Higher Education and Research, Mysuru, Karnataka, India.
Rosemary EdwinDepartment of Microbiology, School of Life Sciences, JSS Academy of Higher Education and Research, Mysuru, Karnataka, India.
Sahana MadashettyDepartment of Grain Science and Technology, CSIR - Central Food Technological Research Institute, Mysuru, Karnataka, India.
Bhargav ShreevatsaDepartment of Microbiology, School of Life Sciences, JSS Academy of Higher Education and Research, Mysuru, Karnataka, India.
Shiva Prasad KollurSchool of Physical Sciences, Amrita Vishwa Vidyapeetham, Mysuru, Karnataka, India.
Chandan ShivamalluDepartment of Biotechnology and Bioinformatics, School of Life Sciences, JSS Academy of Higher Education and Research, Mysuru, Karnataka, India.
Chandan DharmashekarDepartment of Microbiology, School of Life Sciences, JSS Academy of Higher Education and Research, Mysuru, Karnataka, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: High-risk HPV infection initiates cervical cancer through E6-mediated degradation of the p53 tumor suppressor protein via the ubiquitin-proteasome system, leading to apoptotic failure and genomic instability. No FDA-approved therapies currently target HPV E6, representing a significant unmet clinical need. This study aimed to identify repurposable compounds predicted to engage the p53 interface disrupted by E6-mediated proteasomal degradation, as a starting point for future p53-stabilisation studies. Methods: An integrated computational and experimental repurposing strategy was applied, encompassing network pharmacology, molecular docking, density functional theory (DFT), in silico ADMET profiling, and 500 ns molecular dynamics simulations. Network analysis was used to identify the primary hub protein targeted by HPV E6. Candidate compounds were screened for binding affinity against p53 chains C and D within the HPV16-associated degradation complex (PDB: 4XR8). Results: Network analysis confirmed TP53 as the principal hub disrupted by the HPV E6 protein. Among all screened compounds, adenosine demonstrated the highest binding affinities against p53 chains C and D (-6.318 kcal/mol and -7.104 kcal/mol, respectively), suggesting a stabilizing interaction at the p53 interface. DFT calculations revealed moderate electronic stability, with a HOMO-LUMO frontier orbital energy gap of 5.399 eV. ADMET profiling indicated an acceptable pharmacokinetic profile, and molecular dynamics simulations showed lower RMSD and RMSF fluctuations compared to doxorubicin over 500 ns. Conclusion: Adenosine represents a promising drug repurposing candidate for further investigation as a modulator of the HPV E6-p53 interaction, exhibiting favorable computational and preliminary

Indexed as

adenosinecervical cancercytotoxicitydrug repurposingmolecular dynamics simulationnetwork pharmacology

Identifiers

PMID42630734
PMCPMC13494529

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