Evidence map›Paper›PMID 42629443›Full record

ArticleOncogene2026

Epithelial interferon-stimulated gene programs modulate chemotherapy sensitivity in colorectal cancer via EPSTI1.

Erdogan Pekcan Erkan, Emmi Hämäläinen, Julia Kolikova, Tiia Nikupaavola, Karishma Sajnani, Kornelia Kuc, Kalle Ojala, Meiju Kukkonen, Ismaïl Hermelo, Antti Kurttila and 20 more

Abstract read
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In one paragraph

Article in Oncogene, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors.

Erdogan Pekcan Erkan *Center for Cancer Eradication Research, Faculty of Medicine and Health Technology, Tampere University and TAYS Cancer Centre, Tampere University Hospital, Tampere, Finland.ORCID http://orcid.org/0000-0001-9287-4773
Emmi Hämäläinen *Center for Cancer Eradication Research, Faculty of Medicine and Health Technology, Tampere University and TAYS Cancer Centre, Tampere University Hospital, Tampere, Finland.
Julia KolikovaCenter for Cancer Eradication Research, Faculty of Medicine and Health Technology, Tampere University and TAYS Cancer Centre, Tampere University Hospital, Tampere, Finland.
Tiia NikupaavolaCenter for Cancer Eradication Research, Faculty of Medicine and Health Technology, Tampere University and TAYS Cancer Centre, Tampere University Hospital, Tampere, Finland.
Karishma SajnaniCenter for Cancer Eradication Research, Faculty of Medicine and Health Technology, Tampere University and TAYS Cancer Centre, Tampere University Hospital, Tampere, Finland.
Kornelia KucApplied Tumor Genomics Research Program, Research Programs Unit, University of Helsinki, Helsinki, Finland.
Kalle OjalaCenter for Cancer Eradication Research, Faculty of Medicine and Health Technology, Tampere University and TAYS Cancer Centre, Tampere University Hospital, Tampere, Finland.
Meiju KukkonenCenter for Cancer Eradication Research, Faculty of Medicine and Health Technology, Tampere University and TAYS Cancer Centre, Tampere University Hospital, Tampere, Finland.
Ismaïl HermeloDepartment MEDI, Faculty of Medicine and Health Technology, Tampere University, Tampere, Finland.
Antti KurttilaFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.ORCID http://orcid.org/0009-0007-8822-1180
Selja KoskensaloDepartment of Abdominal Surgery, Helsinki University Hospital and University of Helsinki, Helsinki, Finland.
Timo TarvainenDepartment of Abdominal Surgery, Helsinki University Hospital and University of Helsinki, Helsinki, Finland.
Alli LeppäDepartment of Abdominal Surgery, Helsinki University Hospital and University of Helsinki, Helsinki, Finland.
Ilona KeränenDepartment of Abdominal Surgery, Helsinki University Hospital and University of Helsinki, Helsinki, Finland.
Carola HaapamäkiDepartment of Abdominal Surgery, Helsinki University Hospital and University of Helsinki, Helsinki, Finland.
Essi KarjalainenDepartment of Abdominal Surgery, Helsinki University Hospital and University of Helsinki, Helsinki, Finland.ORCID http://orcid.org/0000-0002-0760-4275
Monika Carpelan-HolmströmDepartment of Abdominal Surgery, Helsinki University Hospital and University of Helsinki, Helsinki, Finland.
Laura Renkonen-SinisaloDepartment of Abdominal Surgery, Helsinki University Hospital and University of Helsinki, Helsinki, Finland.
Laura KoskenvuoDepartment of Abdominal Surgery, Helsinki University Hospital and University of Helsinki, Helsinki, Finland.
Pauli PuolakkainenDepartment of Abdominal Surgery, Helsinki University Hospital and University of Helsinki, Helsinki, Finland.
Jukka-Pekka MecklinSport and Health Sciences, Jyväskylä University, Jyväskylä, Finland.
Juha P VäyrynenTranslational Medicine Research Unit, Medical Research Center Oulu, Oulu University Hospital and University of Oulu, Oulu, Finland.
Elina VirolainenDepartment of Pathology, Helsinki University Hospital, Helsinki, Finland.
iCAN
Matti NykterCenter for Cancer Eradication Research, Faculty of Medicine and Health Technology, Tampere University and TAYS Cancer Centre, Tampere University Hospital, Tampere, Finland.ORCID http://orcid.org/0000-0001-6956-2843
Lauri A AaltonenApplied Tumor Genomics Research Program, Research Programs Unit, University of Helsinki, Helsinki, Finland.ORCID http://orcid.org/0000-0001-6839-4286
Alfonso UrbanucciCenter for Cancer Eradication Research, Faculty of Medicine and Health Technology, Tampere University and TAYS Cancer Centre, Tampere University Hospital, Tampere, Finland.ORCID http://orcid.org/0000-0003-2931-3652
Anna LepistöApplied Tumor Genomics Research Program, Research Programs Unit, University of Helsinki, Helsinki, Finland.
Ari RistimäkiApplied Tumor Genomics Research Program, Research Programs Unit, University of Helsinki, Helsinki, Finland.
Toni T SeppäläCenter for Cancer Eradication Research, Faculty of Medicine and Health Technology, Tampere University and TAYS Cancer Centre, Tampere University Hospital, Tampere, Finland. toni.seppala@tuni.fi.

Funding

Kreftforeningen (Norwegian Cancer Society) 198016-2018
6 · The paper itself

Abstract

Although chemotherapy in colorectal cancer (CRC) primarily targets epithelial tumor cells, the epithelial cell-intrinsic mechanisms underlying heterogeneous treatment responses remain poorly understood. We integrated the genomic, transcriptomic, and in vitro drug response profiles of CRC patient-derived tumor organoids (PDTOs) with functional assays to identify epithelial cell-intrinsic determinants of chemotherapy response. An epithelial interferon-stimulated gene (ISG) program, reflecting JAK-STAT pathway activity, was associated with reduced chemosensitivity in PDTOs. Single-cell RNA sequencing data of CRC tumors before and after neoadjuvant chemotherapy showed persistent epithelial ISG expression, with EPSTI1 notably enriched in tumors with incomplete pathological responses. Functional studies demonstrated that EPSTI1 knockdown reduced CRC cell viability and enhanced chemosensitivity. Pharmacologic JAK-STAT inhibition with ruxolitinib suppressed ISG expression and attenuated chemotherapy-induced ISG upregulation. These findings highlight the utility of PDTOs for studying tumor-intrinsic mechanisms of treatment response and identify EPSTI1 as an epithelial modulator of chemosensitivity.

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.