Evidence map›Paper›PMID 42626114›Full record

ArticleFrontiers in bioinformatics2026

Spatial transcriptomics reveal heterogeneous cell‒cell interactions among brain regions in cuprizone model consistent with multiple sclerosis lesions.

Hui-Hsin Tsai, Sarbottam Piya, Jing Wang, Jing Zhu, Wenxing Hu, Andrew R Gehrke, Shaolong Cao, Amanda J Guise, Su Jing Chan, Mark Sheehan and 20 more

Abstract read
In one paragraph

Article in Frontiers in bioinformatics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors.

Hui-Hsin Tsai *Biogen Inc., Cambridge, MA, United States.
Sarbottam Piya *Biogen Inc., Cambridge, MA, United States.
Jing WangBiogen Inc., Cambridge, MA, United States.
Jing ZhuBiogen Inc., Cambridge, MA, United States.
Wenxing HuBiogen Inc., Cambridge, MA, United States.
Andrew R GehrkeBiogen Inc., Cambridge, MA, United States.
Shaolong CaoBiogen Inc., Cambridge, MA, United States.
Amanda J GuiseBiogen Inc., Cambridge, MA, United States.
Su Jing ChanBiogen Inc., Cambridge, MA, United States.
Mark SheehanBiogen Inc., Cambridge, MA, United States.
Jenhwa ChuBiogen Inc., Cambridge, MA, United States.
Zhengyu OuyangData Science, BioInfoRx Inc., Madison, WI, United States.
Matthew RyalsPharmaLex Inc., Conshohocken, PA, United States.
Michelle LeeDepartment of Biostatistics, Epidemiology and Informatics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States.
Wanli WangBiogen Inc., Cambridge, MA, United States.
Edward ZhaoBiogen Inc., Cambridge, MA, United States.
Patrick CullenBiogen Inc., Cambridge, MA, United States.
Ravi ChallaBiogen Inc., Cambridge, MA, United States.
Eric MarshallBiogen Inc., Cambridge, MA, United States.
Wanyong ZengBiogen Inc., Cambridge, MA, United States.
Yea Jin Kaeser-WooBiogen Inc., Cambridge, MA, United States.
Chris EhrenfelsBiogen Inc., Cambridge, MA, United States.
Luke JandreskiBiogen Inc., Cambridge, MA, United States.
Helen McLaughlinBiogen Inc., Cambridge, MA, United States.
Thomas M CarlileBiogen Inc., Cambridge, MA, United States.
Jake GagnonBiogen Inc., Cambridge, MA, United States.
Taylor L ReynoldsBiogen Inc., Cambridge, MA, United States.
Mingyao LiDepartment of Biostatistics, Epidemiology and Informatics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States.
Kejie LiBiogen Inc., Cambridge, MA, United States.
Baohong ZhangBiogen Inc., Cambridge, MA, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The cuprizone (CPZ) model is widely used for modeling demyelination in multiple sclerosis (MS) and for testing potential remyelination therapies. To better understand the underlying pathology of the CPZ model and evaluate its translatability, we integrated single-cell and spatial transcriptomics (ST) to investigate spatial cellular and molecular interactions during de- and remyelination in multiple brain regions. ST revealed global demyelination and neuroinflammation in the brain beyond the corpus callosum (CC), with region-specific differences. We identified oligodendroglia and microglia as two major cell types with significant transcriptomic changes in the model. CPZ-associated subclusters of oligodendroglia (marker genes

Indexed as

cell-cell interactioncuprizone modeldemyelinationmultiple sclerosisoligodendrocytesremyelinationsnRNA-seqspatial transcriptomics (ST)

Identifiers

PMID42626114
PMCPMC13490942

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.