Evidence map›Paper›PMID 42625697›Full record

ReviewFrontiers in microbiology2026

Epigenetics, bacterial metabolites and type 2 diabetes: a new view of gut-genome interactions.

Aqeel F Taqi, Ahmad Albuloushi, Ayat Saleh, Fouz Alqaderi, Taiba AlGharib, Lulwa Al-Abdullah, Fawaz Alzaid, Anwar Kandari

Abstract readReview
In one paragraph

Review in Frontiers in microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Aqeel F TaqiDasman Diabetes Institute, Kuwait City, Kuwait.
Ahmad AlbuloushiDasman Diabetes Institute, Kuwait City, Kuwait.
Ayat SalehDasman Diabetes Institute, Kuwait City, Kuwait.
Fouz AlqaderiMinistry of Health, Kuwait City, Kuwait.
Taiba AlGharibMinistry of Health, Kuwait City, Kuwait.
Lulwa Al-AbdullahDasman Diabetes Institute, Kuwait City, Kuwait.
Fawaz AlzaidDasman Diabetes Institute, Kuwait City, Kuwait.
Anwar KandariDasman Diabetes Institute, Kuwait City, Kuwait.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Type 2 diabetes (T2D) is traditionally viewed as a disorder of glucose homeostasis, yet growing evidence suggests that its pathogenesis is deeply influenced by interactions between the gut microbiota and host gene regulation. Bacterial metabolites have emerged as key molecular mediators capable of linking environmental exposures, metabolism and epigenetic control of gene expression. These insights are reshaping current understanding of how microbial signals contribute to metabolic disease. This review examines the emerging role of bacterial metabolites as modulators of host epigenetic landscapes in T2D. We discuss how short-chain fatty acids (SCFAs), particularly butyrate and propionate, regulate chromatin accessibility through histone deacetylase inhibition and changes in histone acetylation. Beyond SCFAs, we highlight additional classes of microbiota-derived metabolites, including tryptophan-derived indoles such as indole-3-propionic acid, polyamines such as spermidine and aromatic amino acid derivatives, that expand the microbiota-epigenetic axis through mechanisms involving DNA methylation, transcriptional regulation, mitochondrial function and inflammatory signaling. These effects occur in a tissue-specific manner across metabolically relevant organs including the colon, liver, pancreatic

Indexed as

bacterial metabolitesDNA methylationepigeneticsSCFAstype 2 diabetes

Identifiers

PMID42625697
PMCPMC13490173

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.