Evidence map›Paper›PMID 42624853›Full record

ArticleScientific data2026

De novo haplotype-resolved genome assembly of the endemic kiwifruit Actinidia hubeiensis.

Zhi Wang, Guangming Hu, Yonghong Zhang, Lei Gao, Xuan Luo, Qin Xiao, Lixia Ye, Qiong Huang, Tao Xiao, Lei Zhang and 1 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

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5 · Who and what money

Authors and funding

11 authors.

Zhi Wang *Hubei Key Laboratory of Germplasm Innovation and Utilization of Fruit Trees, Institute of Fruit and Tea, Hubei Academy of Agricultural Sciences, Wuhan, 430064, China.
Guangming Hu *Shiyan City Key Laboratory of Biological Breeding, Economic Crops Research Institute of Shiyan City, Shiyan, 442000, Hubei, China.
Yonghong ZhangShiyan Key Laboratory of Medicinal Plants and Evolutionary Genetics, Hubei Key Laboratory of Wudang local Chinese Medicine Research, School of Basic Medicine, Hubei University of Medicine, Shiyan, 442000, China.
Lei GaoHubei Key Laboratory of Germplasm Innovation and Utilization of Fruit Trees, Institute of Fruit and Tea, Hubei Academy of Agricultural Sciences, Wuhan, 430064, China.
Xuan LuoHubei Key Laboratory of Germplasm Innovation and Utilization of Fruit Trees, Institute of Fruit and Tea, Hubei Academy of Agricultural Sciences, Wuhan, 430064, China.
Qin XiaoInstitute of Anesthesiology & Pain, Departments of Anesthesiology, Taihe Hospital, Hubei University of Medicine, Shiyan, 442000, China.
Lixia YeHubei Key Laboratory of Germplasm Innovation and Utilization of Fruit Trees, Institute of Fruit and Tea, Hubei Academy of Agricultural Sciences, Wuhan, 430064, China.
Qiong HuangHubei Key Laboratory of Germplasm Innovation and Utilization of Fruit Trees, Institute of Fruit and Tea, Hubei Academy of Agricultural Sciences, Wuhan, 430064, China.
Tao XiaoShiyan City Key Laboratory of Biological Breeding, Economic Crops Research Institute of Shiyan City, Shiyan, 442000, Hubei, China. 15897814573@163.com.
Lei ZhangHubei Key Laboratory of Germplasm Innovation and Utilization of Fruit Trees, Institute of Fruit and Tea, Hubei Academy of Agricultural Sciences, Wuhan, 430064, China. zhanglei@hbaas.com.
Quan JiangSouth China Botanical Garden, Chinese Academy of Sciences, Guangzhou, Guangdong, 510650, China. jiangquan@scbg.ac.cn.

Funding

Earmarked Fund for Hubei Agriculture Research System 2025HBSTX4-08the Central Leading Local Science and Technology Development Special Fund Project 2024EIA033the Technological Innovation Plan Project of Hubei Province 2024BBB020
6 · The paper itself

Abstract

The genus Actinidia, which encompasses the widely cultivated kiwifruit, is characterized by its rich species diversity. Wild Actinidia species serve as invaluable germplasm reservoirs for crop improvement. As an important kiwifruit species, Actinidia hubeiensis represents a unique taxonomic group endemic to Hubei Province, contributing valuable genetic diversity to the genus Actinidia. Here, we present a haplotype-resolved genome assembly for A. hubeiensis. The two haplotype assemblies (Hap1 and Hap2) spanned 658.03 Mb (N50 = 23.16 Mb) and 597.19 Mb (N50 = 20.89 Mb), encoding 35,741 and 36,647 high-confidence protein-coding genes, respectively. Based on comprehensive assessments, both haplotypes demonstrated high completeness (BUSCO completeness > 99%), excellent continuity (LAI up to 21.67), low base-error rates (QV > 40), and nearly complete read mapping rates (> 98%). This genome assembly provides crucial genomic resources for the genus, enriching our understanding of kiwifruit biodiversity and offering new insights into the genetic background and evolutionary characteristics of this distinctive species.

Indexed as

ActinidiaGenome, PlantHaplotypes

Identifiers

PMID42624853
PMCPMC13493893

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.