Evidence map›Paper›PMID 42622701›Full record

ArticleCurrent microbiology2026

Comprehensive Genomic Analysis of the pO157 Plasmid in Enterohemorrhagic Escherichia coli O157:H7 Reveals Non-synonymous Variation in Virulence Factors.

Libia Yael Smith, Pablo Daniel Farace, Julia Sabio Y García, Daniel Vilte, Nahuel Riviere, Mariano Larzábal, Angel Cataldi, Wanderson Marques Da Silva

Abstract read
PubMed Publisher
In one paragraph

Article in Current microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Libia Yael SmithInstituto de Agrobiotecnología y Biología Molecular (IABIMO) - INTA-CONICET, Hurlingham, Argentina.ORCID http://orcid.org/0000-0003-3757-7180
Pablo Daniel FaraceInstituto de Agrobiotecnología y Biología Molecular (IABIMO) - INTA-CONICET, Hurlingham, Argentina.ORCID http://orcid.org/0000-0003-3586-1524
Julia Sabio Y GarcíaInstituto de Agrobiotecnología y Biología Molecular (IABIMO) - INTA-CONICET, Hurlingham, Argentina.ORCID http://orcid.org/0000-0002-7822-2565
Daniel VilteInstituto de Patobiología Veterinaria (IPVet) INTA-CONICET, Hurlingham, Argentina.
Nahuel RiviereInstituto de Agrobiotecnología y Biología Molecular (IABIMO) - INTA-CONICET, Hurlingham, Argentina.ORCID http://orcid.org/0009-0008-8083-2259
Mariano LarzábalInstituto de Agrobiotecnología y Biología Molecular (IABIMO) - INTA-CONICET, Hurlingham, Argentina.ORCID http://orcid.org/0000-0002-1358-6982
Angel Cataldi *Instituto de Agrobiotecnología y Biología Molecular (IABIMO) - INTA-CONICET, Hurlingham, Argentina. cataldi.angeladrian@inta.gob.ar.ORCID http://orcid.org/0000-0002-6744-3477
Wanderson Marques Da Silva *Instituto de Agrobiotecnología y Biología Molecular (IABIMO) - INTA-CONICET, Hurlingham, Argentina. wanderson.marques1@gmail.com.ORCID http://orcid.org/0000-0003-2829-9019

Funding

Agencia Nacional de Promoción Científica y Tecnológica PICT 2018-0118Instituto Nacional de Tecnología Agropecuaria PNSA-PDi 113-P23Programa Iberoamericano de Ciencia y Tecnología para el Desarrollo (CYTED) STEC/SUH Nº 224RT0152
6 · The paper itself

Abstract

Enterohemorrhagic Escherichia coli (EHEC) O157:H7 is a zoonotic pathogen responsible for severe human diseases, including hemolytic uremic syndrome. Its virulence plasmid, pO157, encodes toxins, proteases, and adhesins; however, the extent of genetic variability among strains remains poorly characterized. Here, we analyzed 153 complete pO157 sequences using comparative pan-genomic and structural approaches. Plasmids ranged from 88.2 to 98.1 kb, contained 84-102 coding sequences, and displayed highly conserved GC content (~ 47.85%). The pan-genome comprised 145 genes, including 60 core and 85 accessory genes, many of which encode hypothetical proteins of unknown function. Key pO157-associated genes (ehxA, katP, stcE, espP, and toxB) were present in all analyzed isolates. Subcellular localization predictions indicated that most proteins are cytoplasmic, whereas only a small subset of hypothetical proteins showed potential secretion signals. Comparative structural analyses revealed that the analyzed protein variants maintained highly conserved overall predicted architectures despite localized amino acid variability. Although some substitutions were located within predicted functional regions, the analyses revealed no major structural alterations among variants. Hemolytic activity assays performed in selected strains revealed phenotypic variability that was not exclusively associated with ehxA sequence variation, suggesting the involvement of additional regulatory or genetic factors. Overall, these findings indicate that pO157 maintains a highly conserved genomic organization while preserving limited sequence variability among virulence-associated genes. This study provides a comparative framework for future investigations aimed at understanding the functional significance of pO157-associated genetic variation in EHEC O157:H7.

Indexed as

Escherichia coli O157Genetic VariationGenome, BacterialPlasmidsVirulence FactorsBase CompositionEscherichia coli InfectionsEscherichia coli ProteinsGenomicsHumansEscherichia coli ProteinsVirulence Factors

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.