Evidence map›Paper›PMID 42621531›Full record

ArticleBiochemical engineering journal2025

Development of inducible packaging cell line for rAAV production via CRISPR-Cas9 mediated site-specific integration.

Qiang Fu, Yongdan Wang, Emily Doleh, Mark Blenner, Seongkyu Yoon

Abstract read
In one paragraph

Article in Biochemical engineering journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Viral gene replication enhances AAV vector quality and reduces manufacturing costs.Molecular therapy : the journal of the American Society of Gene Therapy · 2026
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Qiang FuDepartment of Biomedical Engineering and Biotechnology, University of Massachusetts Lowell, Lowell, MA 01854, United States.
Yongdan WangDepartment of Chemical Engineering, University of Massachusetts Lowell, Lowell, MA 01854, United States.
Emily DolehDepartment of Chemical and Biomolecular Engineering, University of Delaware, Newark, DE 19713, United States.
Mark BlennerDepartment of Chemical and Biomolecular Engineering, University of Delaware, Newark, DE 19713, United States.
Seongkyu YoonDepartment of Biomedical Engineering and Biotechnology, University of Massachusetts Lowell, Lowell, MA 01854, United States.

Funding

Establishing a stable production cell line for recombinant AAV through synthetic dynamic regulation and reducing regulatory and metabolic limitationsR21EB036789 · NIBIB · UNIVERSITY OF DELAWARE · PI BLENNER, MARK ALAN, YOON, SEONGKYU · 2025 to 2025
$437k
NIBIB NIH HHS R21 EB036789
6 · The paper itself

Abstract

AAV-mediated gene therapy is a quickly growing segment of the pharmaceutical market; however, the current transient transfection process to produce rAAV has several challenges. The stable cells are ideal for large-scale continuous production, overcoming the drawbacks in the current transient transfection and streamlining rAAV production. In this study, we proposed to use synthetic inducible promoters to control the viral component expression and develop the baseline of HEK293T stable cells via site-specific integration mediated with CRISPR-Cas9, targeting safe harbor sites of human genome (ROSA26, AAVS1, and CCR5 locus). With a total of three round integrations, stable cell pools were developed and evaluated at each round of integration. Single clones were further characterized for each integration round. Regarding the stable pools, the 5' and 3' junction PCR results confirmed the site-specific integration to each locus. The genome copy result showed that AAV components, including Rep78/68, E2A, E4orf6, Cap, and Rep52/40, were successfully integrated into the host cell genome. Genome and capsid titer after induction confirmed rAAV production for stable cell pools in each round. The packaging cell line (after 2nd round integration) was able to produce rAAV. However, it was observed that the genome titer was ten-fold lower than that of rAAV products done with triple plasmids transfection. The out-to-out PCR and qPCR assay results further confirm the site-specific integration. This research demonstrates the feasibility of developing the inducible stable cell line with the refactored viral vectors via a site-specific integration.

Indexed as

CRISPR-Cas9 site-specific integrationGene therapyInducible circuit designRAAV productionStable packaging cell lineSynthetic biology

Identifiers

PMID42621531
PMCPMC13488690

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.