Evidence map›Paper›PMID 42617883›Full record

ArticleThe Journal of allergy and clinical immunology2026

Classroom microbiome signatures of pest management associate with reduced asthma symptoms.

Minsik Kim, Ching-Ying Huang, Ye Sun, Amparito Cunningham, Michael J Tisza, Diane R Gold, Petros Koutrakis, Wanda Phipatanakul, Peggy S Lai

Registry-linked trialAbstract read
In one paragraph

Article in The Journal of allergy and clinical immunology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02291302 (School Inner-City Asthma Intervention Study), which is not on this map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02291302 nacompletednot on this map

School Inner-City Asthma Intervention Study

TypeinterventionalSponsorBoston Children's HospitalRan2015 to 2020Enrolled236ConditionsAsthmaArmsintegrated pest management, air purifier, No intervention (control)
3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Minsik KimDivision of Pulmonary and Critical Care Medicine, Department of Medicine, Massachusetts General Hospital, Boston, Mass; Harvard Medical School, Boston, Mass; Department of Biological Engineering, Inha University, Incheon, Korea.
Ching-Ying HuangDivision of Pulmonary and Critical Care Medicine, Department of Medicine, Massachusetts General Hospital, Boston, Mass.
Ye SunHarvard Medical School, Boston, Mass; Division of Pulmonary Medicine, Department of Medicine, Boston Children's Hospital, Boston, Mass.
Amparito CunninghamDivision of Allergy and Immunology, Department of Medicine, Boston Children's Hospital, Boston, Mass.
Michael J TiszaDepartment of Molecular Virology and Microbiology, Center for Metagenomics and Microbiome Research, Baylor College of Medicine, Houston, Tex.
Diane R GoldHarvard Medical School, Boston, Mass; Department of Environmental Health, T. H. Chan School of Public Health, Harvard University, Boston, Mass; Department of Medicine, Brigham and Women's Hospital, Boston, Mass.
Petros KoutrakisDepartment of Environmental Health, T. H. Chan School of Public Health, Harvard University, Boston, Mass.
Wanda PhipatanakulHarvard Medical School, Boston, Mass; Division of Allergy and Immunology, Department of Medicine, Boston Children's Hospital, Boston, Mass.
Peggy S LaiDivision of Pulmonary and Critical Care Medicine, Department of Medicine, Massachusetts General Hospital, Boston, Mass; Harvard Medical School, Boston, Mass; Division of Pulmonary Medicine, Department of Medicine, Boston Children's Hospital, Boston, Mass; Department of Environmental Health, T. H. Chan School of Public Health, Harvard University, Boston, Mass. Electronic address: plai@mgh.harvard.edu.

Funding

SICAS- Diversity SupplementU01AI110397 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI PHIPATANAKUL, WANDA · 2015 to 2020
$8.8M
The school microbiome and asthma morbidity in inner-city childrenR01AI144119 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI LAI, PEGGY SUE · 2019 to 2023
$3.7M
Midcareer Investigator Award: Urban School Allergen Exposures and Childhood AsthmK24AI106822 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI PHIPATANAKUL, WANDA · 2013 to 2022
$1.9M
High efficiency particulate air cleaner intervention to reduce respiratory virus exposure in elementary schoolsR21AI178155 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI LAI, PEGGY SUE · 2023 to 2024
$490k
Molecular epidemiology of respiratory virus exposure in elementary schoolsR21AI175965 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI LAI, PEGGY SUE · 2023 to 2024
$481k
Mentoring the Next Generation of Patient-Oriented Researchers in Environmental, Microbiome, and Virome Influences on HealthK24AI199258 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI Peggy Sue Lai · 2026 to 2026
$216k
NIAID NIH HHS K24 AI106822NIAID NIH HHS K24 AI199258NIAID NIH HHS R01 AI144119NIAID NIH HHS R21 AI175965NIAID NIH HHS R21 AI178155NIAID NIH HHS U01 AI110397
6 · The paper itself

Abstract

backgroundIntegrated pest management (IPM) is thought to improve asthma symptoms through reduced mouse allergen exposure. Whether IPM acts through changes in mouse-associated microbes remains unknown.

objectivesWe examined the effects of school-based IPM on the classroom microbiome and sought to determine the association between intervention microbiome signatures and student asthma morbidity.

methodsIn this ancillary study based on a randomized placebo-controlled clinical trial of school IPM and classroom high-efficiency air purifiers (ClinicalTrials.gov NCT02291302), we performed deep metagenomics sequencing of longitudinally collected dust samples from 208 classrooms in 41 schools of 236 children with active, physician-diagnosed asthma with prospective follow-up of asthma severity during the school year. We assessed the effect of the interventions on classroom microbial communities in intention-to-treat analyses. Sparse partial least squares models were used to identify microbial signatures of the interventions, and the association between these microbial signatures and asthma morbidity was assessed by mixed-effects models, controlling for covariates including mouse allergen exposure.

resultsIPM significantly altered classroom bacterial and phage community structure and increased bacterial, archaeal, and fungal diversity. A classroom microbiome signature of IPM was identified (area under the curve = 0.84) and was associated with lower odds of any asthma symptom days in the past 2 weeks (odds ratio = 0.47; 95% confidence interval, 0.22, 0.97; P = .043) and lower Composite Asthma Severity Index (β = -0.92; 95% confidence interval, -1.51, -0.33; P = .002), adjusting for mouse allergen levels and student characteristics.

conclusionIPM-associated changes in the classroom microbiome are associated with lower asthma morbidity independent of mouse allergen exposure.

Indexed as

Asthma morbiditybuilt environment microbiomeintegrated pest managementmicrobiomemycobiomephageomeshotgun metagenomics

Identifiers

PMID42617883
PMCPMC13618729

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.