Evidence map›Paper›PMID 42614712›Full record

ArticleComputational and structural biotechnology journal2026

MetaOmixTools: A User-Friendly Web Suite for Meta-analysis of Ranked Features and Functional Enrichment.

Rubén Grillo-Risco, Maksym Kupchyk Tiurin, Carla Perpiñá-Clérigues, Francisco J Cordero Felipe, Samuel Lozano Juárez, María Iglesia-Vayá, Francisco García-García

Abstract read
In one paragraph

Article in Computational and structural biotechnology journal, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Rubén Grillo-RiscoComputational Biomedicine Laboratory, Principe Felipe Research Centre (CIPF), Valencia 46012, Spain.ORCID https://orcid.org/0000-0003-1558-8364
Maksym Kupchyk TiurinMolecular, Cellular and Genomic Biomedicine Research Group, Instituto de Investigación Sanitaria La Fe (IIS La Fe), Valencia, Spain.ORCID https://orcid.org/0009-0000-0875-8914
Carla Perpiñá-ClériguesComputational Biomedicine Laboratory, Principe Felipe Research Centre (CIPF), Valencia 46012, Spain.ORCID https://orcid.org/0000-0003-0401-4015
Francisco J Cordero FelipeTuberculosis Genomics Unit, Instituto de Biomedicina de Valencia (IBV), CSIC, Valencia, Spain.ORCID https://orcid.org/0009-0001-8531-0547
Samuel Lozano JuárezCardiovascular Proteomics Laboratory, Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC), Madrid 28029, Spain.ORCID https://orcid.org/0009-0000-2602-5773
María Iglesia-VayáJoint Unit in Biomedical Imaging and Artificial Intelligence FISABIO-CIPF, Foundation for the Promotion of Health and Biomedical Research of Valencia Region, Valencia, Spain.ORCID https://orcid.org/0000-0003-4505-8399
Francisco García-GarcíaComputational Biomedicine Laboratory, Principe Felipe Research Centre (CIPF), Valencia 46012, Spain.ORCID https://orcid.org/0000-0001-8354-5636

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The growing number of omics datasets in public repositories provides an opportunity to enhance data reusability through data integration; however, complex statistical barriers often hinder the effective combination of independent studies. To address this problem, we present MetaOmixTools, an interactive web-based suite that streamlines the meta-analysis of ranked feature lists and functional enrichment profiles. The platform integrates 2 primary modules-MetaRank and MetaEnrich-within a code-free environment. MetaRank generates robust consensus rankings from multiple lists by implementing weighted (e.g., rank product) and unweighted (e.g., robust rank aggregation) strategies, while MetaEnrich performs functional meta-analyses by combining probability values from individual overrepresentation analyses using established statistical techniques. Using case studies, we established consensus rankings for acute spinal cord injury across heterogeneous platforms, identifying conserved inflammatory marker genes in the up-regulated gene list (e.g.,

Identifiers

PMID42614712
PMCPMC13483920

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.