Evidence map›Paper›PMID 42599275›Full record

ArticleMicrobial genomics2026

Skuas as sentinels of high pathogenicity avian influenza H5N1 on the Antarctic Peninsula in the 2024/2025 austral summer.

Michelle Wille, Will Abbott, Darrel Day, Yi-Mo Deng, Xiaomin Dong, Ted Gibson, Ryan Hope-Inglis, Michelle McCulley, Ida Olsson, Arvind Varsani and 3 more

Abstract read
In one paragraph

Article in Microbial genomics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Michelle WilleWHO Collaborating Centre for Reference and Research, at the Peter Doherty Institute for Infection and Immunity, Melbourne, Victoria, Australia.
Will AbbottIntrepid Travel, Sydney, Australia.
Darrel DayConsulting Antarctica, Sydney, Australia.
Yi-Mo DengWHO Collaborating Centre for Reference and Research, at the Peter Doherty Institute for Infection and Immunity, Melbourne, Victoria, Australia.
Xiaomin DongWHO Collaborating Centre for Reference and Research, at the Peter Doherty Institute for Infection and Immunity, Melbourne, Victoria, Australia.
Ted GibsonDepartment of Microbiology and Immunology, University of Melbourne, at the Peter Doherty Institute for Infection and Immunity, Melbourne, Victoria, Australia.
Ryan Hope-InglisIntrepid Travel, Sydney, Australia.
Michelle McCulleyDivision of Health, University of Waikato, Private Bag 3105, Hamilton 3240, New Zealand.
Ida OlssonIntrepid Travel, Sydney, Australia.
Arvind VarsaniBiodesign Center for Fundamental and Applied Microbiomics, Center for Evolution and Medicine and School of Life Sciences, Arizona State University, Tempe, USA.
Teri VisentinSchool of Life and Environmental Sciences, Deakin University, Geelong, Australia.
Matthew WaltersSchool of Biological Sciences, University of Canterbury, Christchurch, New Zealand.
Meagan DewarFuture Regions Research Centre, Federation University of Australia, Berwick, Victoria, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite Antarctica's geographic isolation, the first incursion of high pathogenicity avian influenza (HPAI) H5N1 was detected in the 2023/2024 austral summer. Surveillance for HPAI H5N1 in Antarctica remains patchy due to logistical, financial and infrastructure challenges, with many suspected cases remaining unconfirmed and few viral genome sequences available to date. Through the 2024/2025 austral summer, we undertook five sampling expeditions to the South Shetland Islands and Antarctic Peninsula facilitated by cruise ships/operators. Across more than 500 faecal environmental samples collected from apparently healthy penguins and marine mammals, we found no detectable evidence of HPAI H5N1. However, HPAI H5N1 was detected in all but one of the skua carcasses sampled, which, in most cases, were found within metres of penguin sub-colonies. All HPAI H5N1 viral genome sequences from skuas on the Antarctic Peninsula fell within a single lineage, which included those genomes from skuas sampled in the 2024/2025 season from the South Shetland Islands. Genomes were in a different clade to those from the Antarctic Peninsula collected in the 2023/2024 austral summer. Our results confirm that although the prevalence may be low, HPAI H5N1 is recurring in Antarctica, emphasizing the need for ongoing surveillance to monitor and mitigate threats to wildlife, even in the planet's most isolated regions.

Indexed as

Influenza A Virus, H5N1 SubtypeInfluenza in BirdsSpheniscidaeAnimalsAntarctic RegionsGenome, ViralPhylogenySeasonsAntarcticaavian influenza virusdisease ecologyH5N1high pathogenicity avian influenza (HPAI)penguinsskuas

Identifiers

PMID42599275
PMCPMC13476044

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.