Evidence map›Paper›PMID 42589231›Full record

ArticleInternational journal of molecular sciences2026

Cross-Omic Comparative Analysis Identifies Transcriptomic Signatures and Exploratory Gene Set-Level Signals in Sporadic Creutzfeldt-Jakob Disease.

Ramandeep Kaur Oberoi, Deepti Gurung, Laura K Harris

Abstract readComparative Study
In one paragraph

Article in International journal of molecular sciences, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Ramandeep Kaur OberoiDepartment of Health Informatics, School of Health Professions, Rutgers, The State University of New Jersey, Newark, NJ 07107, USA.
Deepti GurungHarris Analytics Institute, DeWitt, MI 48820, USA.
Laura K HarrisHarris Analytics Institute, DeWitt, MI 48820, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sporadic Creutzfeldt-Jakob disease (sCJD) is a rapidly progressive fatal neurodegenerative disease whose basis of pathogenesis remains incompletely defined. Public datasets allow molecular changes to be compared across transcriptomic, post-transcriptional, and epigenomic layers, but comparisons are limited by differences in tissue source and platform. We performed a cross-omic comparative analysis of four sCJD case-control datasets spanning mRNA, miRNA, and DNA methylation layers. In this study, cross-omic refers to comparison of independently analyzed molecular datasets rather than joint multi-omic modeling of matched molecular layers from the same samples. Differential feature analysis, overrepresentation analysis, and gene set enrichment analysis were conducted within each layer. Reproducibility was evaluated across discovery and validation cohorts, followed by cross-layer comparison at the gene level and GO-BP gene set level. FDR-controlled overlap was treated as the primary analysis, whereas nominal

Indexed as

Creutzfeldt-Jakob SyndromeTranscriptomeCase-Control StudiesDNA MethylationGene Expression ProfilingHumansMicroRNAsMultiomicsRNA, MessengerMicroRNAsRNA, Messengercell–substrate adhesioncross-omic analysisDNA methylationgene set enrichmentmiRNAprion diseasesporadic Creutzfeldt–Jakob diseasetranscriptomics

Identifiers

PMID42589231
PMCPMC13465255

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.