Evidence map›Paper›PMID 42587808›Full record

ReviewCells2026

bHLH Family Transcription Factors: Molecular Switches in Plant Specialized Metabolism.

Xinpei Han, Guodong Chen, Jun Peng, Nan Cao, Fuguang Li, Sumei Wan

Abstract readReview
In one paragraph

Review in Cells, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xinpei HanCollege of Agriculture, Tarim University, Alar 843300, China.ORCID 0000-0001-5406-4200
Guodong ChenCollege of Agriculture, Tarim University, Alar 843300, China.ORCID 0000-0002-0996-0089
Jun PengNational Nanfan Research Institute, Chinese Academy of Agricultural Sciences, Sanya 572024, China.
Nan CaoCollege of Agriculture, Tarim University, Alar 843300, China.
Fuguang LiInstitute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China.
Sumei WanCollege of Agriculture, Tarim University, Alar 843300, China.

Funding

National Nanfan Research Institute, Chinese Academy of Agricultural Sciences Grant No. 325RC850National Nanfan Research Institute, Chinese Academy of Agricultural Sciences Grant No. NHXXRCXM202360Tarim University Grant No. 32541089the Tarim University President's Fund No. TDZKBS202601
6 · The paper itself

Abstract

Plant specialized metabolites connect genetic programs and environmental responses with ecologically and economically valuable natural products. Their accumulation is rarely constitutive, varying instead with tissue identity, developmental stage, stress exposure, hormone signaling, and cellular storage capacity. This review examines basic helix-loop-helix (bHLH) transcription factors as regulatory switch points in plant specialized metabolism, with emphasis on the jasmonate-JAZ-MYC module. In resting tissues, JAZ repressors constrain MYC/bHLH activity; after wounding, herbivory, pathogen challenge, or elicitation, jasmonoyl-isoleucine triggers COI1-dependent JAZ turnover, releasing MYC factors to bind E-box/G-box motifs, recruit coregulators such as MED25, and activate biosynthetic genes or downstream transcription-factor cascades. Plant lineages have repeatedly adapted this regulatory logic to control terpenoids, alkaloids, phenylpropanoids, flavonoids, glucosinolates, phytoalexins, and related metabolites. Comparative examples include Arabidopsis sesquiterpenes and glucosinolates, Taxus taxanes, Artemisia artemisinin, Catharanthus terpenoid indole alkaloids, Salvia phenolic acids and tanshinones, Ginkgo terpene trilactones, rice diterpenoid phytoalexins, and cotton gossypol. Across these systems, bHLH output depends on dimer choice, promoter grammar, chromatin accessibility, hormone crosstalk, partner transcription factors, and cell-type competence. Six shared principles emerge: signal gating, topology matched to pathway architecture, partner-dependent promoter decoding, spatial competence, feedback rheostats, and evidence-dependent transferability. We further discuss evidence standards, multi-omics-guided factor discovery, miRNA-mediated post-transcriptional control, and engineering strategies for crop defense, food quality, medicinal-metabolite production, and synthetic biology. Unlike pathway- or MYC2-centered surveys, this review organizes the literature within a direct-cascade-hybrid framework that integrates promoter grammar, spatial competence, storage anatomy, and an explicit evidence hierarchy.

Indexed as

Basic Helix-Loop-Helix ProteinsPlant ProteinsPlantsCyclopentanesGene Expression Regulation, PlantOxylipinsBasic Helix-Loop-Helix ProteinsCyclopentanesjasmonic acidOxylipinsPlant ProteinsbHLH transcription factorjasmonateMYC2specialized metabolism

Identifiers

PMID42587808
PMCPMC13464745

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.