Evidence map›Paper›PMID 42584714›Full record

ArticleArchives of virology2026

Uncovering host transcriptional responses to tilapia lake virus (TiLV) through De novo RNA-seq assembly in Nile tilapia, Oreochromis niloticus.

G Rebecca, A Uma, K G Tirumurugaan, S Gangatharan, S A Shanmugam, A Kathirvel Pandian

Abstract read
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In one paragraph

Article in Archives of virology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

G RebeccaInstitute of Fisheries Post graduate studies, Tamil Nadu Dr.J.Jayalalithaa Fisheries University, Vaniyanchavadi, Tamil Nadu, India.
A UmaInstitute of Fisheries Post graduate studies, Tamil Nadu Dr.J.Jayalalithaa Fisheries University, Vaniyanchavadi, Tamil Nadu, India. uma@tnfu.ac.in.ORCID http://orcid.org/0000-0002-9429-4075
K G TirumurugaanTamil Nadu Veterinary and Animal Sciences University, Madhavaram, Chennai, Tamil Nadu, 600051, India.
S GangatharanInstitute of Fisheries Post graduate studies, Tamil Nadu Dr.J.Jayalalithaa Fisheries University, Vaniyanchavadi, Tamil Nadu, India.
S A ShanmugamInstitute of Fisheries Post graduate studies, Tamil Nadu Dr.J.Jayalalithaa Fisheries University, Vaniyanchavadi, Tamil Nadu, India.
A Kathirvel PandianNational Bureau of Fish Genetic Resources, PMFGR Centre, Kochi, Kerala, 682018, India.

Funding

Tamil Nadu Innovation and Initiatives Tamil Nadu Innovation and Initiatives
6 · The paper itself

Abstract

Tilapia lake virus (TiLV) has emerged as an important pathogen that negatively impacts tilapia farming globally. Using RNA sequencing technology, this study investigated the liver transcriptomic profile of apparently healthy and TiLV-infected Oreochromis niloticus from wild. RNA sequence libraries generated 3,356 differentially expressed genes (DEGs), with 1,726 genes that were upregulated. Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis identified 680 different pathways with differential regulation of the metabolic and immune-related pathways indicating that TiLV may interfere in host metabolism and replicate to establish the infection. This study provides transcriptomic insights into the liver responses of naturally TiLV-infected wild O. niloticus and highlights key immune and metabolic pathways associated with viral infection.

Indexed as

CichlidsFish DiseasesHost-Pathogen InteractionsTranscriptomeAnimalsGene Expression ProfilingLiverPicornaviralesRNA-Seq

Identifiers

PMID42584714

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.