Evidence map›Paper›PMID 42579026›Full record

ArticleArchives of virology2026

The first complete genome sequence of iris yellow spot virus from South America and comparative analysis with isolates of different geographic origin.

Rosana Blawid, Edivânio Rodrigues de Araújo, Leandro Delalibera Geremias, Dennis Knierim, Priscila Duarte Ramirez, Paolo Margaria

Abstract readComparative Study
In one paragraph

Article in Archives of virology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Rosana BlawidDepartment of Agronomy, Laboratory of Plant Virology, Federal Rural University of Pernambuco, Recife, Brazil.
Edivânio Rodrigues de AraújoEpagri- Experimental Station of Ituporanga, Santa Catarina, Brazil.
Leandro Delalibera GeremiasEpagri- Experimental Station of Ituporanga, Santa Catarina, Brazil.
Dennis KnierimPlant Virus Department, Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures GmbH, Inhoffenstraße 7B, Braunschweig, Germany.
Priscila Duarte RamirezDepartment of Agronomy, Laboratory of Plant Virology, Federal Rural University of Pernambuco, Recife, Brazil.
Paolo MargariaPlant Virus Department, Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures GmbH, Inhoffenstraße 7B, Braunschweig, Germany. paolo.margaria@dsmz.de.ORCID https://orcid.org/0000-0001-8670-1331

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We report the first complete nucleotide sequence of an isolate of iris yellow spot virus (IYSV; Orthotospovirus iridimaculaflavi) from Brazil. Isolate Br-25 was collected in 2025 in Imbuia, Santa Catarina, from symptomatic onion scapes. The genome of IYSV-Br-25 consisted of L, M and S genomic RNAs of 8879, 4866 and 3223 nt, respectively. Comparison of the L segment nucleotide (nt) sequence showed identities ~96% to most of the available L segment sequences from IYSV isolates of different geographic origin, with the exception of isolate DSMZ PV-0528, which showed 89.0% nt identity. The M and S segment nt sequences showed highest identity to an isolate recently reported from sugarbeet in Idaho, USA. In silico-generated Hinf1 digestion profile assigned the isolate to the previously defined IYSV

Indexed as

Genome, ViralOnionsPlant DiseasesTospovirusBase SequenceBrazilGenetic VariationPhylogenyRNA, ViralSouth AmericaWhole Genome SequencingRNA, Viral

Identifiers

PMID42579026
PMCPMC13461650

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.