Evidence map›Paper›PMID 42576162›Full record

ArticleAlzheimer's & dementia : the journal of the Alzheimer's Association2026

Unique transcriptomic alterations in 5XFAD;PS19 mouse model identify glial lipid dysregulation and coordinated microglial-oligodendrocyte responses.

Jung Hyun Park, Byungwook Kim, Md Mamun Al-Amin, Mason Douglas Tate, Ahmad Daniel Sharify, Sutha K John, Hande Karahan, Hui-Chen Lu, Luke Child Dabin, Jungsu Kim

Abstract read
In one paragraph

Article in Alzheimer's & dementia : the journal of the Alzheimer's Association, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jung Hyun ParkStark Neurosciences Research Institute, Indiana University School of Medicine, Indianapolis, Indiana, USA.ORCID https://orcid.org/0000-0002-6810-8574
Byungwook KimStark Neurosciences Research Institute, Indiana University School of Medicine, Indianapolis, Indiana, USA.ORCID https://orcid.org/0000-0001-8390-7713
Md Mamun Al-AminStark Neurosciences Research Institute, Indiana University School of Medicine, Indianapolis, Indiana, USA.ORCID https://orcid.org/0000-0003-4234-7152
Mason Douglas TateStark Neurosciences Research Institute, Indiana University School of Medicine, Indianapolis, Indiana, USA.ORCID https://orcid.org/0000-0002-8967-4006
Ahmad Daniel SharifyStark Neurosciences Research Institute, Indiana University School of Medicine, Indianapolis, Indiana, USA.ORCID https://orcid.org/0009-0004-8762-6977
Sutha K JohnStark Neurosciences Research Institute, Indiana University School of Medicine, Indianapolis, Indiana, USA.ORCID https://orcid.org/0000-0002-4642-9174
Hande KarahanStark Neurosciences Research Institute, Indiana University School of Medicine, Indianapolis, Indiana, USA.ORCID https://orcid.org/0000-0003-3192-7362
Hui-Chen LuProgram in Neuroscience, Indiana University, Bloomington, Indiana, USA.ORCID https://orcid.org/0000-0002-6628-7177
Luke Child DabinStark Neurosciences Research Institute, Indiana University School of Medicine, Indianapolis, Indiana, USA.ORCID https://orcid.org/0000-0001-6365-291X
Jungsu KimStark Neurosciences Research Institute, Indiana University School of Medicine, Indianapolis, Indiana, USA.ORCID https://orcid.org/0000-0002-6931-8581

Funding

Mapping Cellular Resolution Connectopathies in Aging and Alzheimer's DiseaseU01AG076804 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Hong-Wei Dong, Bruce T Lamb · 2022 to 2026
$14.3M
Molecular and genetic studies of NMNAT2 in neuroprotectionR01NS086794 · NINDS · TRUSTEES OF INDIANA UNIVERSITY · PI LU, HUI-CHEN · 2014 to 2025
$5.0M
Molecular genetic analyses of transcriptional dysregulation in Alzheimers diseaseR01AG077829 · NIA · INDIANA UNIVERSITY INDIANAPOLIS · PI Jungsu Kim · 2022 to 2026
$3.6M
The role of ABI3 in Alzheimers diseaseRF1AG074543 · NIA · INDIANA UNIVERSITY INDIANAPOLIS · PI KIM, JUNGSU · 2021 to 2021
$2.3M
NIA NIH HHS R01 AG077829NIA NIH HHS RF1 AG074543NIA NIH HHS U01 AG076804NIH HHS R01AG077829NIH HHS R01NS086794NIH HHS RF1AG074543NIH HHS U01AG076804NINDS NIH HHS R01 NS086794
6 · The paper itself

Abstract

introductionAlzheimer's disease (AD) features amyloid beta (Aβ) plaques and tau tangles, yet how their coexistence reshapes brain transcriptomic programs remains unclear.

methodsWe performed high-quality, sex-balanced single-nucleus RNA sequencing of 5XFAD (Aβ), PS19 (tau), and combined 5XFAD;PS19 mice.

resultsWe identified transcriptional programs that emerged most prominently under combined pathology. These programs included disruption of glial lipid metabolism and immune pathways at the network level, alongside immune and synaptic alterations coordinated between microglia and oligodendrocytes. Cross-species analyses further revealed that the pathway-level alterations under combined pathology, particularly in immune, lipid, and cell cycle programs, exhibited the strongest concordance with human AD datasets, underscoring their translational relevance. DISCUSSION: Beyond benchmarking mouse models, this study provides a high-quality transcriptomic resource to dissect multicellular disease mechanisms in AD and to prioritize therapeutic targets for a network-level systems pharmacology approach.

Indexed as

Alzheimer DiseaseLipid MetabolismMicrogliaNeurogliaOligodendrogliaTranscriptomeAnimalsBrainDisease Models, AnimalFemaleHumansMiceMice, Transgenic5XFAD;PS19 mouse modelAccelerating Medicines Partnership Program for Alzheimer's DiseaseAlzheimer's diseaseamyloid betacross‐species alignmentneurodegenerationsingle‐nucleus RNA sequencingtautranscriptome

Identifiers

PMID42576162
PMCPMC13457352

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.